Literature DB >> 19416924

Amplification of signaling via cellular allosteric relay and protein disorder.

Buyong Ma1, Ruth Nussinov.   

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Year:  2009        PMID： 19416924      PMCID： PMC2678435          DOI： 10.1073/pnas.0903024106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  22 in total

1.  Evolutionarily conserved networks of residues mediate allosteric communication in proteins.

Authors:  Gürol M Süel; Steve W Lockless; Mark A Wall; Rama Ranganathan
Journal:  Nat Struct Biol       Date:  2003-01

Review 2.  Is allostery an intrinsic property of all dynamic proteins?

Authors:  K Gunasekaran; Buyong Ma; Ruth Nussinov
Journal:  Proteins       Date:  2004-11-15

3.  The cAMP binding domain: an ancient signaling module.

Authors:  Helen M Berman; Lynn F Ten Eyck; David S Goodsell; Nina M Haste; Alexandr Kornev; Susan S Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-23       Impact factor: 11.205

Review 4.  Allosteric mechanisms of signal transduction.

Authors:  Jean-Pierre Changeux; Stuart J Edelstein
Journal:  Science       Date:  2005-06-03       Impact factor: 47.728

Review 5.  Signal amplification by allosteric catalysis.

Authors:  Lei Zhu; Eric V Anslyn
Journal:  Angew Chem Int Ed Engl       Date:  2006-02-13       Impact factor: 15.336

Review 6.  Integrins: bidirectional, allosteric signaling machines.

Authors:  Richard O Hynes
Journal:  Cell       Date:  2002-09-20       Impact factor: 41.582

7.  Modeling the cAMP-induced allosteric transition using the crystal structure of CAP-cAMP at 2.1 A resolution.

Authors:  J M Passner; S C Schultz; T A Steitz
Journal:  J Mol Biol       Date:  2000-12-15       Impact factor: 5.469

8.  Cooperativity in transcription factor binding to the coactivator CREB-binding protein (CBP). The mixed lineage leukemia protein (MLL) activation domain binds to an allosteric site on the KIX domain.

Authors:  Natalie K Goto; Tsaffrir Zor; Maria Martinez-Yamout; H Jane Dyson; Peter E Wright
Journal:  J Biol Chem       Date:  2002-08-29       Impact factor: 5.157

9.  Intrinsic disorder as a mechanism to optimize allosteric coupling in proteins.

Authors:  Vincent J Hilser; E Brad Thompson
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-09       Impact factor: 11.205

10.  Structure of catabolite gene activator protein at 2.9 A resolution suggests binding to left-handed B-DNA.

Authors:  D B McKay; T A Steitz
Journal:  Nature       Date:  1981-04-30       Impact factor: 49.962
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  24 in total

1.  Activation of nanoscale allosteric protein domain motion revealed by neutron spin echo spectroscopy.

Authors:  Bela Farago; Jianquan Li; Gabriel Cornilescu; David J E Callaway; Zimei Bu
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

2.  How do transcription factors select specific binding sites in the genome?

Authors:  Yongping Pan; Chung-Jung Tsai; Buyong Ma; Ruth Nussinov
Journal:  Nat Struct Mol Biol       Date:  2009-11       Impact factor: 15.369

3.  Multiple-targeting and conformational selection in the estrogen receptor: computation and experiment.

Authors:  Peng Yuan; Kaiwei Liang; Buyong Ma; Nan Zheng; Ruth Nussinov; Jian Huang
Journal:  Chem Biol Drug Des       Date:  2011-04-27       Impact factor: 2.817

Review 4.  How do dynamic cellular signals travel long distances?

Authors:  Ruth Nussinov
Journal:  Mol Biosyst       Date:  2011-07-18

5.  Allo-network drugs: harnessing allostery in cellular networks.

Authors:  Ruth Nussinov; Chung-Jung Tsai; Peter Csermely
Journal:  Trends Pharmacol Sci       Date:  2011-09-16       Impact factor: 14.819

Review 6.  Dynamic multiprotein assemblies shape the spatial structure of cell signaling.

Authors:  Ruth Nussinov; Hyunbum Jang
Journal:  Prog Biophys Mol Biol       Date:  2014-07-18       Impact factor: 3.667

7.  Protein charge and mass contribute to the spatio-temporal dynamics of protein-protein interactions in a minimal proteome.

Authors:  Yu Xu; Hong Wang; Ruth Nussinov; Buyong Ma
Journal:  Proteomics       Date:  2013-03-18       Impact factor: 3.984

8.  Classification of genes and putative biomarker identification using distribution metrics on expression profiles.

Authors:  Hung-Chung Huang; Daniel Jupiter; Vincent VanBuren
Journal:  PLoS One       Date:  2010-02-04       Impact factor: 3.240

9.  Maximum entropy reconstructions of dynamic signaling networks from quantitative proteomics data.

Authors:  Jason W Locasale; Alejandro Wolf-Yadlin
Journal:  PLoS One       Date:  2009-08-26       Impact factor: 3.240

10.  Influence of sequence changes and environment on intrinsically disordered proteins.

Authors:  Amrita Mohan; Vladimir N Uversky; Predrag Radivojac
Journal:  PLoS Comput Biol       Date:  2009-09-04       Impact factor: 4.475
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