Literature DB >> 19394210

Polysomes, P bodies and stress granules: states and fates of eukaryotic mRNAs.

Vidya Balagopal1, Roy Parker.   

Abstract

The control of translation and mRNA degradation plays a key role in the regulation of eukaryotic gene expression. In the cytosol, mRNAs engaged in translation are distributed throughout the cytosol, while translationally inactive mRNAs can accumulate in P bodies, in complex with mRNA degradation and translation repression machinery, or in stress granules, which appear to be mRNAs stalled in translation initiation. Here we discuss how these different granules suggest a dynamic model for the metabolism of cytoplasmic mRNAs wherein they cycle between different mRNP states with different functional properties and subcellular locations.

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Year:  2009        PMID: 19394210      PMCID: PMC2740377          DOI: 10.1016/j.ceb.2009.03.005

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  57 in total

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Authors:  S Tharun; R Parker
Journal:  Mol Cell       Date:  2001-11       Impact factor: 17.970

2.  Computational modeling and experimental analysis of nonsense-mediated decay in yeast.

Authors:  Dan Cao; Roy Parker
Journal:  Cell       Date:  2003-05-16       Impact factor: 41.582

3.  Enhancement of U4/U6 small nuclear ribonucleoprotein particle association in Cajal bodies predicted by mathematical modeling.

Authors:  Mirko Klingauf; David Stanek; Karla M Neugebauer
Journal:  Mol Biol Cell       Date:  2006-09-20       Impact factor: 4.138

4.  Formation of stress granules inhibits apoptosis by suppressing stress-responsive MAPK pathways.

Authors:  Kyoko Arimoto; Hiroyuki Fukuda; Shinobu Imajoh-Ohmi; Haruo Saito; Mutsuhiro Takekawa
Journal:  Nat Cell Biol       Date:  2008-10-05       Impact factor: 28.824

5.  Accumulation of polyadenylated mRNA, Pab1p, eIF4E, and eIF4G with P-bodies in Saccharomyces cerevisiae.

Authors:  Muriel Brengues; Roy Parker
Journal:  Mol Biol Cell       Date:  2007-05-02       Impact factor: 4.138

6.  The deacetylase HDAC6 is a novel critical component of stress granules involved in the stress response.

Authors:  Sohee Kwon; Yu Zhang; Patrick Matthias
Journal:  Genes Dev       Date:  2007-12-15       Impact factor: 11.361

7.  A role for Q/N-rich aggregation-prone regions in P-body localization.

Authors:  Martin A M Reijns; Ross D Alexander; Michael P Spiller; Jean D Beggs
Journal:  J Cell Sci       Date:  2008-07-08       Impact factor: 5.285

8.  The RasGAP-associated endoribonuclease G3BP assembles stress granules.

Authors:  Helene Tourrière; Karim Chebli; Latifa Zekri; Brice Courselaud; Jean Marie Blanchard; Edouard Bertrand; Jamal Tazi
Journal:  J Cell Biol       Date:  2003-03-17       Impact factor: 10.539

9.  Cytoplasmic foci are sites of mRNA decay in human cells.

Authors:  Nicolas Cougot; Sylvie Babajko; Bertrand Séraphin
Journal:  J Cell Biol       Date:  2004-04-05       Impact factor: 10.539

10.  Stress-dependent relocalization of translationally primed mRNPs to cytoplasmic granules that are kinetically and spatially distinct from P-bodies.

Authors:  Nathaniel P Hoyle; Lydia M Castelli; Susan G Campbell; Leah E A Holmes; Mark P Ashe
Journal:  J Cell Biol       Date:  2007-10-01       Impact factor: 10.539

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  184 in total

Review 1.  The regulation of AβPP expression by RNA-binding proteins.

Authors:  Cara J Westmark; James S Malter
Journal:  Ageing Res Rev       Date:  2012-04-05       Impact factor: 10.895

2.  From cis-regulatory elements to complex RNPs and back.

Authors:  Fátima Gebauer; Thomas Preiss; Matthias W Hentze
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-07-01       Impact factor: 10.005

3.  Regulation of protein levels in subcellular domains through mRNA transport and localized translation.

Authors:  Dianna E Willis; Jeffery L Twiss
Journal:  Mol Cell Proteomics       Date:  2010-02-18       Impact factor: 5.911

Review 4.  Function of a retrotransposon nucleocapsid protein.

Authors:  Suzanne B Sandmeyer; Kristina A Clemens
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

5.  DDX6 recruits translational silenced human reticulocyte 15-lipoxygenase mRNA to RNP granules.

Authors:  Isabel S Naarmann; Christiane Harnisch; Gerhard Müller-Newen; Henning Urlaub; Antje Ostareck-Lederer; Dirk H Ostareck
Journal:  RNA       Date:  2010-09-30       Impact factor: 4.942

6.  The RNA-binding protein CUG-BP1 increases survivin expression in oesophageal cancer cells through enhanced mRNA stability.

Authors:  Elizabeth T Chang; James M Donahue; Lan Xiao; Yuhong Cui; Jaladanki N Rao; Douglas J Turner; William S Twaddell; Jian-Ying Wang; Richard J Battafarano
Journal:  Biochem J       Date:  2012-08-15       Impact factor: 3.857

7.  The Catalytic Activity of the Ubp3 Deubiquitinating Protease Is Required for Efficient Stress Granule Assembly in Saccharomyces cerevisiae.

Authors:  Regina Nostramo; Sapna N Varia; Bo Zhang; Megan M Emerson; Paul K Herman
Journal:  Mol Cell Biol       Date:  2015-10-26       Impact factor: 4.272

8.  Combined Antibody/Lectin Enrichment Identifies Extensive Changes in the O-GlcNAc Sub-proteome upon Oxidative Stress.

Authors:  Albert Lee; Devin Miller; Roger Henry; Venkata D P Paruchuri; Robert N O'Meally; Tatiana Boronina; Robert N Cole; Natasha E Zachara
Journal:  J Proteome Res       Date:  2016-10-14       Impact factor: 4.466

Review 9.  CELFish ways to modulate mRNA decay.

Authors:  Irina Vlasova-St Louis; Alexa M Dickson; Paul R Bohjanen; Carol J Wilusz
Journal:  Biochim Biophys Acta       Date:  2013-01-15

10.  Structural organization of the polysomes adjacent to mammalian processing bodies (P-bodies).

Authors:  Nicolas Cougot; Anne-Elisabeth Molza; Emmanuel Giudice; Annie Cavalier; Daniel Thomas; Reynald Gillet
Journal:  RNA Biol       Date:  2013-01-16       Impact factor: 4.652

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