Literature DB >> 23328451

CELFish ways to modulate mRNA decay.

Irina Vlasova-St Louis1, Alexa M Dickson, Paul R Bohjanen, Carol J Wilusz.   

Abstract

The CELF family of RNA-binding proteins regulates many steps of mRNA metabolism. Although their best characterized function is in pre-mRNA splice site choice, CELF family members are also powerful modulators of mRNA decay. In this review we focus on the different modes of regulation that CELF proteins employ to mediate mRNA decay by binding to GU-rich elements. After starting with an overview of the importance of CELF proteins during development and disease pathogenesis, we then review the mRNA networks and cellular pathways these proteins regulate and the mechanisms by which they influence mRNA decay. Finally, we discuss how CELF protein activity is modulated during development and in response to cellular signals. We conclude by highlighting the priorities for new experiments in this field. This article is part of a Special Issue entitled: RNA Decay mechanisms.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2013        PMID: 23328451      PMCID: PMC3640684          DOI: 10.1016/j.bbagrm.2013.01.001

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  176 in total

1.  Genome-wide analysis of mRNA decay in resting and activated primary human T lymphocytes.

Authors:  Arvind Raghavan; Rachel L Ogilvie; Cavan Reilly; Michelle L Abelson; Shalini Raghavan; Jayprakash Vasdewani; Mitchell Krathwohl; Paul R Bohjanen
Journal:  Nucleic Acids Res       Date:  2002-12-15       Impact factor: 16.971

2.  Stress granule assembly is mediated by prion-like aggregation of TIA-1.

Authors:  Natalie Gilks; Nancy Kedersha; Maranatha Ayodele; Lily Shen; Georg Stoecklin; Laura M Dember; Paul Anderson
Journal:  Mol Biol Cell       Date:  2004-09-15       Impact factor: 4.138

3.  Enhanced CCAAT/enhancer-binding protein beta-liver-enriched inhibitory protein production by Oltipraz, which accompanies CUG repeat-binding protein-1 (CUGBP1) RNA-binding protein activation, leads to inhibition of preadipocyte differentiation.

Authors:  Eun Ju Bae; Sang Geon Kim
Journal:  Mol Pharmacol       Date:  2005-06-16       Impact factor: 4.436

4.  Celf1 regulation of dmrt2a is required for somite symmetry and left-right patterning during zebrafish development.

Authors:  Takaaki Matsui; Akihiro Sasaki; Naoko Akazawa; Hifumi Otani; Yasumasa Bessho
Journal:  Development       Date:  2012-08-16       Impact factor: 6.868

5.  Alternative splicing dysregulation secondary to skeletal muscle regeneration.

Authors:  James P Orengo; Amanda J Ward; Thomas A Cooper
Journal:  Ann Neurol       Date:  2011-03-11       Impact factor: 10.422

6.  TDP-43 promotes microRNA biogenesis as a component of the Drosha and Dicer complexes.

Authors:  Yukio Kawahara; Ai Mieda-Sato
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-09       Impact factor: 11.205

7.  RNA targets of TDP-43 identified by UV-CLIP are deregulated in ALS.

Authors:  Shangxi Xiao; Teresa Sanelli; Samar Dib; David Sheps; Joseph Findlater; Juan Bilbao; Julia Keith; Lorne Zinman; Ekaterina Rogaeva; Janice Robertson
Journal:  Mol Cell Neurosci       Date:  2011-03-21       Impact factor: 4.314

8.  A strategy to analyze the phenotypic consequences of inhibiting the association of an RNA-binding protein with a specific RNA.

Authors:  Marie Cibois; Carole Gautier-Courteille; Audrey Vallée; Luc Paillard
Journal:  RNA       Date:  2009-11-23       Impact factor: 4.942

9.  Mechanism of the internal ribosome entry site-mediated translation of serine hydroxymethyltransferase 1.

Authors:  Jennifer T Fox; Patrick J Stover
Journal:  J Biol Chem       Date:  2009-09-04       Impact factor: 5.157

10.  The PARN deadenylase targets a discrete set of mRNAs for decay and regulates cell motility in mouse myoblasts.

Authors:  Jerome E Lee; Ju Youn Lee; Jarrett Trembly; Jeffrey Wilusz; Bin Tian; Carol J Wilusz
Journal:  PLoS Genet       Date:  2012-08-30       Impact factor: 5.917

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  25 in total

1.  The cataract-linked RNA-binding protein Celf1 post-transcriptionally controls the spatiotemporal expression of the key homeodomain transcription factors Pax6 and Prox1 in lens development.

Authors:  Sandeep Aryal; Justine Viet; Bailey A T Weatherbee; Archana D Siddam; Francisco G Hernandez; Carole Gautier-Courteille; Luc Paillard; Salil A Lachke
Journal:  Hum Genet       Date:  2020-06-27       Impact factor: 4.132

Review 2.  Coupling mRNA synthesis and decay.

Authors:  Katherine A Braun; Elton T Young
Journal:  Mol Cell Biol       Date:  2014-08-25       Impact factor: 4.272

Review 3.  Post-transcriptional regulation of cytokine signaling by AU-rich and GU-rich elements.

Authors:  Irina Vlasova-St Louis; Paul R Bohjanen
Journal:  J Interferon Cytokine Res       Date:  2014-04       Impact factor: 2.607

Review 4.  RNA-binding proteins and post-transcriptional regulation in lens biology and cataract: Mediating spatiotemporal expression of key factors that control the cell cycle, transcription, cytoskeleton and transparency.

Authors:  Salil A Lachke
Journal:  Exp Eye Res       Date:  2021-12-11       Impact factor: 3.467

5.  Viral manipulation of host mRNA decay.

Authors:  Liang Guo; Irina Vlasova-St Louis; Paul R Bohjanen
Journal:  Future Virol       Date:  2018-02-23       Impact factor: 1.831

6.  Roles of RNA-binding Proteins and Post-transcriptional Regulation in Driving Male Germ Cell Development in the Mouse.

Authors:  Donny D Licatalosi
Journal:  Adv Exp Med Biol       Date:  2016       Impact factor: 2.622

Review 7.  Post-transcriptional regulation of cytokine and growth factor signaling in cancer.

Authors:  Irina Vlasova-St Louis; Paul R Bohjanen
Journal:  Cytokine Growth Factor Rev       Date:  2016-12-02       Impact factor: 7.638

8.  Antagonistic regulation of mRNA expression and splicing by CELF and MBNL proteins.

Authors:  Eric T Wang; Amanda J Ward; Jennifer M Cherone; Jimena Giudice; Thomas T Wang; Daniel J Treacy; Nicole J Lambert; Peter Freese; Tanvi Saxena; Thomas A Cooper; Christopher B Burge
Journal:  Genome Res       Date:  2015-04-16       Impact factor: 9.043

9.  Celf1 is required for formation of endoderm-derived organs in zebrafish.

Authors:  Naoyuki Tahara; Yasumasa Bessho; Takaaki Matsui
Journal:  Int J Mol Sci       Date:  2013-09-03       Impact factor: 5.923

10.  Altered CELF1 binding to target transcripts in malignant T cells.

Authors:  Paul R Bohjanen; Mai Lee Moua; Liang Guo; Ammanuel Taye; Irina A Vlasova-St Louis
Journal:  RNA       Date:  2015-08-06       Impact factor: 4.942

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