Literature DB >> 19369704

A computational study of discrete mechanical tissue models.

P Pathmanathan1, J Cooper, A Fletcher, G Mirams, P Murray, J Osborne, J Pitt-Francis, A Walter, S J Chapman.   

Abstract

A computational study of discrete 'cell-centre' approaches to modelling the evolution of a collection of cells is undertaken. The study focuses on the mechanical aspects of the tissue, in order to separate the passive mechanical response of the model from active effects such as cell-growth and cell division. Issues which arise when implementing these models are described, and a series of numerical mechanical experiments is performed. It is shown that discrete tissues modelled this way typically exhibit elastic-plastic behaviour under slow compression, and act as a brittle linear elastic solid under slow tension. Both overlapping spheres and Voronoi-tessellation-based models are examined, and the effect of different cell-cell interaction force laws on the bulk mechanical properties of the tissue is determined. This correspondence allows parameters in the cell-based model to be chosen to be compatible with bulk tissue measurements.

Mesh:

Year:  2009        PMID: 19369704     DOI: 10.1088/1478-3975/6/3/036001

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  29 in total

1.  Mechanics and remodelling of cell packings in epithelia.

Authors:  D B Staple; R Farhadifar; J-C Röper; B Aigouy; S Eaton; F Jülicher
Journal:  Eur Phys J E Soft Matter       Date:  2010-11-17       Impact factor: 1.890

2.  A one-dimensional individual-based mechanical model of cell movement in heterogeneous tissues and its coarse-grained approximation.

Authors:  R J Murphy; P R Buenzli; R E Baker; M J Simpson
Journal:  Proc Math Phys Eng Sci       Date:  2019-07-24       Impact factor: 2.704

3.  A free boundary mechanobiological model of epithelial tissues.

Authors:  Tamara A Tambyah; Ryan J Murphy; Pascal R Buenzli; Matthew J Simpson
Journal:  Proc Math Phys Eng Sci       Date:  2020-11-18       Impact factor: 2.704

Review 4.  Mechanocellular models of epithelial morphogenesis.

Authors:  Alexander G Fletcher; Fergus Cooper; Ruth E Baker
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-05-19       Impact factor: 6.237

Review 5.  How and why to build a mathematical model: A case study using prion aggregation.

Authors:  Mikahl Banwarth-Kuhn; Suzanne Sindi
Journal:  J Biol Chem       Date:  2020-01-31       Impact factor: 5.157

6.  A cell-based mechanical model of coronary artery tunica media.

Authors:  N B Melnikova; A I Svitenkov; D R Hose; A G Hoekstra
Journal:  J R Soc Interface       Date:  2017-07       Impact factor: 4.118

7.  A quantitative high-resolution computational mechanics cell model for growing and regenerating tissues.

Authors:  Paul Van Liedekerke; Johannes Neitsch; Tim Johann; Enrico Warmt; Ismael Gonzàlez-Valverde; Stefan Hoehme; Steffen Grosser; Josef Kaes; Dirk Drasdo
Journal:  Biomech Model Mechanobiol       Date:  2019-11-20

8.  Establishment of maternal blood supply to the placenta: insights into plugging, unplugging and trophoblast behaviour from an agent-based model.

Authors:  Rojan Saghian; Gib Bogle; Joanna L James; Alys R Clark
Journal:  Interface Focus       Date:  2019-08-16       Impact factor: 3.906

9.  Retinal stem cells modulate proliferative parameters to coordinate post-embryonic morphogenesis in the eye of fish.

Authors:  Erika Tsingos; Burkhard Höckendorf; Thomas Sütterlin; Stephan Kirchmaier; Niels Grabe; Lazaro Centanin; Joachim Wittbrodt
Journal:  Elife       Date:  2019-03-26       Impact factor: 8.140

Review 10.  The same but different: cell intercalation as a driver of tissue deformation and fluidity.

Authors:  Robert J Tetley; Yanlan Mao
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-09-24       Impact factor: 6.237

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