Literature DB >> 19321420

A Mycobacterium tuberculosis ligand-binding Mn/Fe protein reveals a new cofactor in a remodeled R2-protein scaffold.

Charlotta S Andersson1, Martin Högbom.   

Abstract

Chlamydia trachomatis R2c is the prototype for a recently discovered group of ribonucleotide reductase R2 proteins that use a heterodinuclear Mn/Fe redox cofactor for radical generation and storage. Here, we show that the Mycobacterium tuberculosis protein Rv0233, an R2 homologue and a potential virulence factor, contains the heterodinuclear manganese/iron-carboxylate cofactor but displays a drastic remodeling of the R2 protein scaffold into a ligand-binding oxidase. The first structural characterization of the heterodinuclear cofactor shows that the site is highly specific for manganese and iron in their respective positions despite a symmetric arrangement of coordinating residues. In this protein scaffold, the Mn/Fe cofactor supports potent 2-electron oxidations as revealed by an unprecedented tyrosine-valine crosslink in the active site. This wolf in sheep's clothing defines a distinct functional group among R2 homologues and may represent a structural and functional counterpart of the evolutionary ancestor of R2s and bacterial multicomponent monooxygenases.

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Year:  2009        PMID: 19321420      PMCID: PMC2667070          DOI: 10.1073/pnas.0812971106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Three-dimensional structure of the free radical protein of ribonucleotide reductase.

Authors:  P Nordlund; B M Sjöberg; H Eklund
Journal:  Nature       Date:  1990-06-14       Impact factor: 49.962

2.  Phi/psi-chology: Ramachandran revisited.

Authors:  G J Kleywegt; T A Jones
Journal:  Structure       Date:  1996-12-15       Impact factor: 5.006

3.  Crystal structures of oxidized dinuclear manganese centres in Mn-substituted class I ribonucleotide reductase from Escherichia coli: carboxylate shifts with implications for O2 activation and radical generation.

Authors:  M Högbom; M E Andersson; P Nordlund
Journal:  J Biol Inorg Chem       Date:  2001-03       Impact factor: 3.358

4.  Rational reprogramming of the R2 subunit of Escherichia coli ribonucleotide reductase into a self-hydroxylating monooxygenase.

Authors:  J Baldwin; W C Voegtli; N Khidekel; P Moënne-Loccoz; C Krebs; A S Pereira; B A Ley; B H Huynh; T M Loehr; P J Riggs-Gelasco; A C Rosenzweig; J M Bollinger
Journal:  J Am Chem Soc       Date:  2001-07-25       Impact factor: 15.419

5.  Dioxygen Activation and Methane Hydroxylation by Soluble Methane Monooxygenase: A Tale of Two Irons and Three Proteins A list of abbreviations can be found in Section 7.

Authors:  Maarten Merkx; Daniel A. Kopp; Matthew H. Sazinsky; Jessica L. Blazyk; Jens Müller; Stephen J. Lippard
Journal:  Angew Chem Int Ed Engl       Date:  2001-08-03       Impact factor: 15.336

6.  Correlating structure with function in bacterial multicomponent monooxygenases and related diiron proteins.

Authors:  Matthew H Sazinsky; Stephen J Lippard
Journal:  Acc Chem Res       Date:  2006-08       Impact factor: 22.384

7.  Complementary analysis of the Mycobacterium tuberculosis proteome by two-dimensional electrophoresis and isotope-coded affinity tag technology.

Authors:  Frank Schmidt; Samuel Donahoe; Kristine Hagens; Jens Mattow; Ulrich E Schaible; Stefan H E Kaufmann; Ruedi Aebersold; Peter R Jungblut
Journal:  Mol Cell Proteomics       Date:  2003-10-13       Impact factor: 5.911

8.  CD and MCD studies of the effects of component B variant binding on the biferrous active site of methane monooxygenase.

Authors:  Natasa Mitić; Jennifer K Schwartz; Brian J Brazeau; John D Lipscomb; Edward I Solomon
Journal:  Biochemistry       Date:  2008-07-16       Impact factor: 3.162

9.  Branched activation- and catalysis-specific pathways for electron relay to the manganese/iron cofactor in ribonucleotide reductase from Chlamydia trachomatis.

Authors:  Wei Jiang; Lana Saleh; Eric W Barr; Jiajia Xie; Monique Maslak Gardner; Carsten Krebs; J Martin Bollinger
Journal:  Biochemistry       Date:  2008-07-26       Impact factor: 3.162

10.  Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.

Authors:  S T Cole; R Brosch; J Parkhill; T Garnier; C Churcher; D Harris; S V Gordon; K Eiglmeier; S Gas; C E Barry; F Tekaia; K Badcock; D Basham; D Brown; T Chillingworth; R Connor; R Davies; K Devlin; T Feltwell; S Gentles; N Hamlin; S Holroyd; T Hornsby; K Jagels; A Krogh; J McLean; S Moule; L Murphy; K Oliver; J Osborne; M A Quail; M A Rajandream; J Rogers; S Rutter; K Seeger; J Skelton; R Squares; S Squares; J E Sulston; K Taylor; S Whitehead; B G Barrell
Journal:  Nature       Date:  1998-06-11       Impact factor: 49.962

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  38 in total

1.  A comparison of two-electron chemistry performed by the manganese and iron heterodimer and homodimers.

Authors:  Katarina Roos; Per E M Siegbahn
Journal:  J Biol Inorg Chem       Date:  2011-11-15       Impact factor: 3.358

2.  Use of structural phylogenetic networks for classification of the ferritin-like superfamily.

Authors:  Daniel Lundin; Anthony M Poole; Britt-Marie Sjöberg; Martin Högbom
Journal:  J Biol Chem       Date:  2012-04-25       Impact factor: 5.157

3.  Mössbauer properties of the diferric cluster and the differential iron(II)-binding affinity of the iron sites in protein R2 of class Ia Escherichia coli ribonucleotide reductase: a DFT/electrostatics study.

Authors:  Wen-Ge Han; Gregory M Sandala; Debra Ann Giammona; Donald Bashford; Louis Noodleman
Journal:  Dalton Trans       Date:  2011-08-12       Impact factor: 4.390

4.  Unsymmetrical bimetallic complexes with M(II)-(μ-OH)-M(III) cores (M(II)M(III) = Fe(II)Fe(III), Mn(II)Fe(III), Mn(II)Mn(III)): structural, magnetic, and redox properties.

Authors:  Yohei Sano; Andrew C Weitz; Joseph W Ziller; Michael P Hendrich; A S Borovik
Journal:  Inorg Chem       Date:  2013-08-30       Impact factor: 5.165

5.  Mechanism of ADP-ribosylation removal revealed by the structure and ligand complexes of the dimanganese mono-ADP-ribosylhydrolase DraG.

Authors:  Catrine L Berthold; He Wang; Stefan Nordlund; Martin Högbom
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-12       Impact factor: 11.205

6.  The manganese/iron-carboxylate proteins: what is what, where are they, and what can the sequences tell us?

Authors:  Martin Högbom
Journal:  J Biol Inorg Chem       Date:  2010-03       Impact factor: 3.358

7.  Evidence for a Di-μ-oxo Diamond Core in the Mn(IV)/Fe(IV) Activation Intermediate of Ribonucleotide Reductase from Chlamydia trachomatis.

Authors:  Ryan J Martinie; Elizabeth J Blaesi; Carsten Krebs; J Martin Bollinger; Alexey Silakov; Christopher J Pollock
Journal:  J Am Chem Soc       Date:  2017-01-27       Impact factor: 15.419

8.  Oxoiron(IV) complexes as synthons for the assembly of heterobimetallic centers such as the Fe/Mn active site of Class Ic ribonucleotide reductases.

Authors:  Ang Zhou; Patrick M Crossland; Apparao Draksharapu; Andrew J Jasniewski; Scott T Kleespies; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2017-12-07       Impact factor: 3.358

Review 9.  Assembly of nonheme Mn/Fe active sites in heterodinuclear metalloproteins.

Authors:  Julia J Griese; Vivek Srinivas; Martin Högbom
Journal:  J Biol Inorg Chem       Date:  2014-04-26       Impact factor: 3.358

10.  Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein.

Authors:  Effie C Kisgeropoulos; Julia J Griese; Zachary R Smith; Rui M M Branca; Camille R Schneider; Martin Högbom; Hannah S Shafaat
Journal:  J Am Chem Soc       Date:  2020-03-09       Impact factor: 15.419

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