Literature DB >> 22083102

A comparison of two-electron chemistry performed by the manganese and iron heterodimer and homodimers.

Katarina Roos1, Per E M Siegbahn.   

Abstract

Two-electron chemistry with an iron dimer, a manganese dimer, and a manganese-iron dimer as a catalyst has been modeled using B3LYP* hybrid density functional theory. The recently discovered MnFe proteins form (at least) two functionally distinct groups, performing radical generation (class Ic ribonucleotide reductase subunit II) and substrate oxidations (subunit II-like ligand-binding oxidases, R2lox), respectively. Proteins from the latter group appear to be functionally similar to the diiron carboxylate proteins that perform two-electron oxidations of substrates, such as methane monooxygenase. To qualitatively determine the potential role of a MnFe center in R2lox, methane hydroxylation with the MnFe heterodimer and with the FeFe and MnMn homodimers is studied. The redox potential of the active state of the Mn(IV)Fe(IV) heterodimer is about 7 kcal mol(-1) lower than that of the active state of the Fe(IV)Fe(IV) homodimer, leading to a high barrier for the rate-limiting hydrogen abstraction with the MnFe site. If the entropy loss is not included, the barriers are lower, and the MnFe heterodimer can therefore have a role in R2lox as an oxidase for larger substrates exergonically bound to the protein. A MnMn center has a high barrier both with and without entropy loss. The higher stability of Fe(IV) in the presence of Mn(IV) in the other site compared with a second Fe(IV) suggests an explanation for the presence of the MnFe site in R2lox: to provide a metal center that is capable of two-electron chemistry, and which is more stable and less sensitive to external reductants than an Fe(IV)Fe(IV) site.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22083102     DOI: 10.1007/s00775-011-0858-8

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  46 in total

1.  Dioxygen Activation by Enzymes Containing Binuclear Non-Heme Iron Clusters.

Authors:  Bradley J. Wallar; John D. Lipscomb
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

2.  Ribonucleotide reductase of Brevibacterium ammoniagenes is a manganese enzyme.

Authors:  A Willing; H Follmann; G Auling
Journal:  Eur J Biochem       Date:  1988-01-04

Review 3.  Cyanobacterial alkane biosynthesis further expands the catalytic repertoire of the ferritin-like 'di-iron-carboxylate' proteins.

Authors:  Carsten Krebs; J Martin Bollinger; Squire J Booker
Journal:  Curr Opin Chem Biol       Date:  2011-04       Impact factor: 8.822

4.  Crystal structure of a bacterial non-haem iron hydroxylase that catalyses the biological oxidation of methane.

Authors:  A C Rosenzweig; C A Frederick; S J Lippard; P Nordlund
Journal:  Nature       Date:  1993-12-09       Impact factor: 49.962

5.  Dioxygen Activation and Methane Hydroxylation by Soluble Methane Monooxygenase: A Tale of Two Irons and Three Proteins A list of abbreviations can be found in Section 7.

Authors:  Maarten Merkx; Daniel A. Kopp; Matthew H. Sazinsky; Jessica L. Blazyk; Jens Müller; Stephen J. Lippard
Journal:  Angew Chem Int Ed Engl       Date:  2001-08-03       Impact factor: 15.336

6.  Conversion of fatty aldehydes to alka(e)nes and formate by a cyanobacterial aldehyde decarbonylase: cryptic redox by an unusual dimetal oxygenase.

Authors:  Ning Li; Hanne Nørgaard; Douglas M Warui; Squire J Booker; Carsten Krebs; J Martin Bollinger
Journal:  J Am Chem Soc       Date:  2011-04-04       Impact factor: 15.419

7.  An active dimanganese(III)-tyrosyl radical cofactor in Escherichia coli class Ib ribonucleotide reductase.

Authors:  Joseph A Cotruvo; Joanne Stubbe
Journal:  Biochemistry       Date:  2010-02-16       Impact factor: 3.162

8.  Branched activation- and catalysis-specific pathways for electron relay to the manganese/iron cofactor in ribonucleotide reductase from Chlamydia trachomatis.

Authors:  Wei Jiang; Lana Saleh; Eric W Barr; Jiajia Xie; Monique Maslak Gardner; Carsten Krebs; J Martin Bollinger
Journal:  Biochemistry       Date:  2008-07-26       Impact factor: 3.162

Review 9.  Ribonucleotide reductases.

Authors:  A Jordan; P Reichard
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

10.  Spectroscopic and electronic structure studies of intermediate X in ribonucleotide reductase R2 and two variants: a description of the FeIV-oxo bond in the FeIII-O-FeIV dimer.

Authors:  Natasa Mitić; Michael D Clay; Lana Saleh; J Martin Bollinger; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2007-06-29       Impact factor: 15.419

View more
  7 in total

1.  X-ray Absorption and Emission Study of Dioxygen Activation by a Small-Molecule Manganese Complex.

Authors:  Julian A Rees; Vlad Martin-Diaconescu; Julie A Kovacs; Serena DeBeer
Journal:  Inorg Chem       Date:  2015-06-10       Impact factor: 5.165

Review 2.  Molecular mechanisms for generating transmembrane proton gradients.

Authors:  M R Gunner; Muhamed Amin; Xuyu Zhu; Jianxun Lu
Journal:  Biochim Biophys Acta       Date:  2013-03-16

Review 3.  Assembly of nonheme Mn/Fe active sites in heterodinuclear metalloproteins.

Authors:  Julia J Griese; Vivek Srinivas; Martin Högbom
Journal:  J Biol Inorg Chem       Date:  2014-04-26       Impact factor: 3.358

4.  Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein.

Authors:  Effie C Kisgeropoulos; Julia J Griese; Zachary R Smith; Rui M M Branca; Camille R Schneider; Martin Högbom; Hannah S Shafaat
Journal:  J Am Chem Soc       Date:  2020-03-09       Impact factor: 15.419

5.  Direct observation of structurally encoded metal discrimination and ether bond formation in a heterodinuclear metalloprotein.

Authors:  Julia J Griese; Katarina Roos; Nicholas Cox; Hannah S Shafaat; Rui M M Branca; Janne Lehtiö; Astrid Gräslund; Wolfgang Lubitz; Per E M Siegbahn; Martin Högbom
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-07       Impact factor: 11.205

6.  Mechanism and selectivity of the dinuclear iron benzoyl-coenzyme A epoxidase BoxB.

Authors:  Rong-Zhen Liao; Per E M Siegbahn
Journal:  Chem Sci       Date:  2015-03-02       Impact factor: 9.825

7.  Ether cross-link formation in the R2-like ligand-binding oxidase.

Authors:  Julia J Griese; Rui M M Branca; Vivek Srinivas; Martin Högbom
Journal:  J Biol Inorg Chem       Date:  2018-06-26       Impact factor: 3.358

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.