Literature DB >> 19203263

Direct observation of the dynamic process underlying allosteric signal transmission.

Sven Brüschweiler1, Paul Schanda, Karin Kloiber, Bernhard Brutscher, Georg Kontaxis, Robert Konrat, Martin Tollinger.   

Abstract

Allosteric regulation is an effective mechanism of control in biological processes. In allosteric proteins a signal originating at one site in the molecule is communicated through the protein structure to trigger a specific response at a remote site. Using NMR relaxation dispersion techniques we directly observe the dynamic process through which the KIX domain of CREB binding protein communicates allosteric information between binding sites. KIX mediates cooperativity between pairs of transcription factors through binding to two distinct interaction surfaces in an allosteric manner. We show that binding the activation domain of the mixed lineage leukemia (MLL) transcription factor to KIX induces a redistribution of the relative populations of KIX conformations toward a high-energy state in which the allosterically activated second binding site is already preformed, consistent with the Monod-Wyman-Changeux (WMC) model of allostery. The structural rearrangement process that links the two conformers and by which allosteric information is communicated occurs with a time constant of 3 ms at 27 degrees C. Our dynamic NMR data reveal that an evolutionarily conserved network of hydrophobic amino acids constitutes the pathway through which information is transmitted.

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Year:  2009        PMID: 19203263     DOI: 10.1021/ja809947w

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  55 in total

1.  Siderocalin Q83 exhibits differential slow dynamics upon ligand binding.

Authors:  Nicolas Coudevylle; Leonhard Geist; Matthias Hoetzinger; Martin Tollinger; Robert Konrat
Journal:  J Biomol NMR       Date:  2011-09-27       Impact factor: 2.835

2.  Interaction energy based protein structure networks.

Authors:  M S Vijayabaskar; Saraswathi Vishveshwara
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

3.  Profiling the dynamic interfaces of fluorinated transcription complexes for ligand discovery and characterization.

Authors:  William C Pomerantz; Ningkun Wang; Ashley K Lipinski; Rurun Wang; Tomasz Cierpicki; Anna K Mapp
Journal:  ACS Chem Biol       Date:  2012-07-02       Impact factor: 5.100

4.  Segmental motions, not a two-state concerted switch, underlie allostery in CheY.

Authors:  Leanna R McDonald; Joshua A Boyer; Andrew L Lee
Journal:  Structure       Date:  2012-06-21       Impact factor: 5.006

5.  Protein conformational exchange measured by 1H R1ρ relaxation dispersion of methyl groups.

Authors:  Ulrich Weininger; Annica T Blissing; Janosch Hennig; Alexandra Ahlner; Zhihong Liu; Hans J Vogel; Mikael Akke; Patrik Lundström
Journal:  J Biomol NMR       Date:  2013-08-02       Impact factor: 2.835

Review 6.  Chemical exchange in biomacromolecules: past, present, and future.

Authors:  Arthur G Palmer
Journal:  J Magn Reson       Date:  2014-04       Impact factor: 2.229

7.  Millisecond dynamics in the allosteric enzyme imidazole glycerol phosphate synthase (IGPS) from Thermotoga maritima.

Authors:  James Lipchock; J Patrick Loria
Journal:  J Biomol NMR       Date:  2009-06-30       Impact factor: 2.835

Review 8.  NMR spectroscopy brings invisible protein states into focus.

Authors:  Andrew J Baldwin; Lewis E Kay
Journal:  Nat Chem Biol       Date:  2009-11       Impact factor: 15.040

Review 9.  NMR reveals novel mechanisms of protein activity regulation.

Authors:  Charalampos G Kalodimos
Journal:  Protein Sci       Date:  2011-04-08       Impact factor: 6.725

10.  Ordering a dynamic protein via a small-molecule stabilizer.

Authors:  Ningkun Wang; Chinmay Y Majmudar; William C Pomerantz; Jessica K Gagnon; Jack D Sadowsky; Jennifer L Meagher; Taylor K Johnson; Jeanne A Stuckey; Charles L Brooks; James A Wells; Anna K Mapp
Journal:  J Am Chem Soc       Date:  2013-02-22       Impact factor: 15.419

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