Literature DB >> 19199475

Sensing of UO22+ and design of logic gates by the application of supramolecular constructs of ion-dependent DNAzymes.

Michal Moshe1, Johann Elbaz, Itamar Willner.   

Abstract

Supramolecular constructs composed of ion-dependent DNAzymes and their substrates were used to develop DNAzyme cascades that enabled the sensitive detection of UO22+ or the activation of logic gate operations. The supramolecular complex between the UO22+-dependent DNAzyme and its substrate leads, in the presence of UO22+, to the cleavage of the substrate and to the release of the HRP-mimicking DNAzyme that enables the optical analysis of UO22+ (detection limit 1 x 10-9 M). Similarly, supramolecular complexes between the Mg2+- and UO22+-dependent DNAzymes and tailored substrates enables the design of the "OR" and "AND" logic gates, using Mg2+ and UO22+ as inputs.

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Year:  2009        PMID: 19199475     DOI: 10.1021/nl803887y

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  16 in total

Review 1.  Metal ion sensors based on DNAzymes and related DNA molecules.

Authors:  Xiao-Bing Zhang; Rong-Mei Kong; Yi Lu
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2011       Impact factor: 10.745

2.  Entropy-driven catalytic reaction-induced hairpin structure switching for fluorometric detection of uranyl ions.

Authors:  Wen Yun; Lin Chen; Zao Yi; Yong Yi; Yongjian Tang; Lizhu Yang
Journal:  Mikrochim Acta       Date:  2019-08-28       Impact factor: 5.833

3.  Label-free, dual-analyte electrochemical biosensors: a new class of molecular-electronic logic gates.

Authors:  Fan Xia; Xiaolei Zuo; Renqiang Yang; Ryan J White; Yi Xiao; Di Kang; Xiong Gong; Arica A Lubin; Alexis Vallée-Bélisle; Jonathan D Yuen; Ben Y B Hsu; Kevin W Plaxco
Journal:  J Am Chem Soc       Date:  2010-06-30       Impact factor: 15.419

4.  Catalytic and molecular beacons for amplified detection of metal ions and organic molecules with high sensitivity.

Authors:  Xiao-Bing Zhang; Zidong Wang; Hang Xing; Yu Xiang; Yi Lu
Journal:  Anal Chem       Date:  2010-06-15       Impact factor: 6.986

Review 5.  DNA as sensors and imaging agents for metal ions.

Authors:  Yu Xiang; Yi Lu
Journal:  Inorg Chem       Date:  2013-12-20       Impact factor: 5.165

6.  Metal-ion-dependent folding of a uranyl-specific DNAzyme: insight into function from fluorescence resonance energy transfer studies.

Authors:  Ying He; Yi Lu
Journal:  Chemistry       Date:  2011-11-03       Impact factor: 5.236

7.  A survey of advancements in nucleic acid-based logic gates and computing for applications in biotechnology and biomedicine.

Authors:  Cuichen Wu; Shuo Wan; Weijia Hou; Liqin Zhang; Jiehua Xu; Cheng Cui; Yanyue Wang; Jun Hu; Weihong Tan
Journal:  Chem Commun (Camb)       Date:  2015-03-04       Impact factor: 6.222

8.  RNA-cleaving deoxyribozyme sensor for nucleic acid analysis: the limit of detection.

Authors:  Yulia V Gerasimova; Evan Cornett; Dmitry M Kolpashchikov
Journal:  Chembiochem       Date:  2010-04-12       Impact factor: 3.164

9.  Aptamer-nanoparticle assembly for logic-based detection.

Authors:  Mohammed I Shukoor; Meghan O Altman; Da Han; Abdullah Tahir Bayrac; Ismail Ocsoy; Zhi Zhu; Weihong Tan
Journal:  ACS Appl Mater Interfaces       Date:  2012-06-18       Impact factor: 9.229

10.  A DNAzyme-gold nanoparticle probe for uranyl ion in living cells.

Authors:  Peiwen Wu; Kevin Hwang; Tian Lan; Yi Lu
Journal:  J Am Chem Soc       Date:  2013-03-26       Impact factor: 15.419

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