Literature DB >> 22650355

Aptamer-nanoparticle assembly for logic-based detection.

Mohammed I Shukoor1, Meghan O Altman, Da Han, Abdullah Tahir Bayrac, Ismail Ocsoy, Zhi Zhu, Weihong Tan.   

Abstract

In this work, gold nanoparticles perform Boolean logic operations in response to two proangiogenic targets important in cancer diagnosis and treatment: PDGF and VEGF. In the absence of protein target, gold nanoparticles are initially dispersed as a red solution; the addition of target proteins causes nanoparticle aggregation, turning the solution blue, as well as the release of dye-labeled aptamer probes, which causes an increase in fluorescence. These outputs constitute an AND or OR gate for simultaneous protein detection. We believe this logic-gate-based detection system will become the basis for novel rapid, cheap, and reliable sensors for diagnostic applications.

Entities:  

Year:  2012        PMID: 22650355      PMCID: PMC3483412          DOI: 10.1021/am300374q

Source DB:  PubMed          Journal:  ACS Appl Mater Interfaces        ISSN: 1944-8244            Impact factor:   9.229


  35 in total

1.  Daily low-dose/continuous capecitabine combined with neo-adjuvant irradiation reduces VEGF and PDGF-BB levels in rectal carcinoma patients.

Authors:  David Loven; Einat Be'ery; Rinat Yerushalmi; Claude Koren; Aaron Sulkes; Idit Lavi; Yuval Shaked; Eyal Fenig
Journal:  Acta Oncol       Date:  2008       Impact factor: 4.089

2.  Engineering a unimolecular DNA-catalytic probe for single lead ion monitoring.

Authors:  Hui Wang; Youngmi Kim; Haipeng Liu; Zhi Zhu; Suwussa Bamrungsap; Weihong Tan
Journal:  J Am Chem Soc       Date:  2009-06-17       Impact factor: 15.419

3.  Easy design of logic gates based on aptazymes and noncrosslinking gold nanoparticle aggregation.

Authors:  Atsushi Ogawa; Mizuo Maeda
Journal:  Chem Commun (Camb)       Date:  2009-07-07       Impact factor: 6.222

4.  Molecular beacons: probes that fluoresce upon hybridization.

Authors:  S Tyagi; F R Kramer
Journal:  Nat Biotechnol       Date:  1996-03       Impact factor: 54.908

5.  Selective colorimetric detection of polynucleotides based on the distance-dependent optical properties of gold nanoparticles.

Authors:  R Elghanian; J J Storhoff; R C Mucic; R L Letsinger; C A Mirkin
Journal:  Science       Date:  1997-08-22       Impact factor: 47.728

6.  "Three-dimensional hybridization" with polyvalent DNA-gold nanoparticle conjugates.

Authors:  Sarah J Hurst; Haley D Hill; Chad A Mirkin
Journal:  J Am Chem Soc       Date:  2008-08-19       Impact factor: 15.419

Review 7.  Molecular engineering of DNA: molecular beacons.

Authors:  Kemin Wang; Zhiwen Tang; Chaoyong James Yang; Youngmi Kim; Xiaohong Fang; Wei Li; Yanrong Wu; Colin D Medley; Zehui Cao; Jun Li; Patrick Colon; Hui Lin; Weihong Tan
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

8.  Angiogenic factors in plasma of brain tumour patients.

Authors:  Aysegul Ilhan; Wolfgang Gartner; Dashurie Neziri; Thomas Czech; Wolfgang Base; Walter H Hörl; Ludwig Wagner
Journal:  Anticancer Res       Date:  2009-02       Impact factor: 2.480

9.  Sensing of UO22+ and design of logic gates by the application of supramolecular constructs of ion-dependent DNAzymes.

Authors:  Michal Moshe; Johann Elbaz; Itamar Willner
Journal:  Nano Lett       Date:  2009-03       Impact factor: 11.189

10.  A role for VEGF as a negative regulator of pericyte function and vessel maturation.

Authors:  Joshua I Greenberg; David J Shields; Samuel G Barillas; Lisette M Acevedo; Eric Murphy; Jianhua Huang; Lea Scheppke; Christian Stockmann; Randall S Johnson; Niren Angle; David A Cheresh
Journal:  Nature       Date:  2008-11-09       Impact factor: 49.962

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  7 in total

1.  A survey of advancements in nucleic acid-based logic gates and computing for applications in biotechnology and biomedicine.

Authors:  Cuichen Wu; Shuo Wan; Weijia Hou; Liqin Zhang; Jiehua Xu; Cheng Cui; Yanyue Wang; Jun Hu; Weihong Tan
Journal:  Chem Commun (Camb)       Date:  2015-03-04       Impact factor: 6.222

2.  Repeatable detection of Ag+ ions using a DNA aptamer-linked hydrogel biochemical sensor integrated with microfluidic heating system.

Authors:  Koki Yoshida; Tomoki Hayashi; Masahiro Takinoue; Hiroaki Onoe
Journal:  Sci Rep       Date:  2022-06-11       Impact factor: 4.996

3.  Single-step nanoplasmonic VEGF165 aptasensor for early cancer diagnosis.

Authors:  Hansang Cho; Erh-Chia Yeh; Raghu Sinha; Ted A Laurence; Jane P Bearinger; Luke P Lee
Journal:  ACS Nano       Date:  2012-08-21       Impact factor: 15.881

Review 4.  Nucleic acid-functionalized transition metal nanosheets for biosensing applications.

Authors:  Liuting Mo; Juan Li; Qiaoling Liu; Liping Qiu; Weihong Tan
Journal:  Biosens Bioelectron       Date:  2016-03-18       Impact factor: 10.618

5.  Multiple advanced logic gates made of DNA-Ag nanocluster and the application for intelligent detection of pathogenic bacterial genes.

Authors:  Xiaodong Lin; Yaqing Liu; Jiankang Deng; Yanlong Lyu; Pengcheng Qian; Yunfei Li; Shuo Wang
Journal:  Chem Sci       Date:  2018-01-08       Impact factor: 9.825

6.  Enhanced sensitivity of VEGF detection using catalase-mediated chemiluminescence immunoassay based on CdTe QD/H2O2 system.

Authors:  Fahimeh Ghavamipour; Hossein Rahmani; Maryam Shanehsaz; Khosro Khajeh; Manouchehr Mirshahi; Reza H Sajedi
Journal:  J Nanobiotechnology       Date:  2020-06-17       Impact factor: 10.435

7.  Universal sensor array for highly selective system identification using two-dimensional nanoparticles.

Authors:  Mustafa Salih Hizir; Neil M Robertson; Mustafa Balcioglu; Esma Alp; Muhit Rana; Mehmet V Yigit
Journal:  Chem Sci       Date:  2017-06-16       Impact factor: 9.825

  7 in total

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