Literature DB >> 19188109

Anatomy-guided lung lobe segmentation in X-ray CT images.

Soumik Ukil1, Joseph M Reinhardt.   

Abstract

The human lungs are divided into five distinct anatomic compartments called the lobes, which are separated by the pulmonary fissures. The accurate identification of the fissures is of increasing importance in the early detection of pathologies, and in the regional functional analysis of the lungs. We have developed an automatic method for the segmentation and analysis of the fissures, based on the information provided by the segmentation and analysis of the airway and vascular trees. This information is used to provide a close initial approximation to the fissures, using a watershed transform on a distance map of the vasculature. In a further refinement step, this estimate is used to construct a region of interest (ROI) encompassing the fissures. The ROI is enhanced using a ridgeness measure, which is followed by a 3-D graph search to find the optimal surface within the ROI. We have also developed an automatic method to detect incomplete fissures, using a fast-marching based segmentation of a projection of the optimal surface. The detected incomplete fissure is used to extrapolate and smoothly complete the fissure. We evaluate the method by testing on data sets from normal subjects and subjects with mild to moderate emphysema.

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Year:  2009        PMID: 19188109      PMCID: PMC5489231          DOI: 10.1109/TMI.2008.929101

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  11 in total

Review 1.  Radiographic and CT appearances of the major fissures.

Authors:  K Hayashi; A Aziz; K Ashizawa; H Hayashi; K Nagaoki; H Otsuji
Journal:  Radiographics       Date:  2001 Jul-Aug       Impact factor: 5.333

2.  Automatic lung segmentation for accurate quantitation of volumetric X-ray CT images.

Authors:  S Hu; E A Hoffman; J M Reinhardt
Journal:  IEEE Trans Med Imaging       Date:  2001-06       Impact factor: 10.048

3.  Atlas-driven lung lobe segmentation in volumetric X-ray CT images.

Authors:  Li Zhang; Eric A Hoffman; Joseph M Reinhardt
Journal:  IEEE Trans Med Imaging       Date:  2006-01       Impact factor: 10.048

4.  Matching and anatomical labeling of human airway tree.

Authors:  Juerg Tschirren; Geoffrey McLennan; Kálmán Palágyi; Eric A Hoffman; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2005-12       Impact factor: 10.048

5.  Intrathoracic airway trees: segmentation and airway morphology analysis from low-dose CT scans.

Authors:  Juerg Tschirren; Eric A Hoffman; Geoffrey McLennan; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2005-12       Impact factor: 10.048

6.  Optimal surface segmentation in volumetric images--a graph-theoretic approach.

Authors:  Kang Li; Xiaodong Wu; Danny Z Chen; Milan Sonka
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-01       Impact factor: 6.226

7.  Supervised enhancement filters: application to fissure detection in chest CT scans.

Authors:  E M van Rikxoort; B van Ginneken; M Klik; M Prokop
Journal:  IEEE Trans Med Imaging       Date:  2008-01       Impact factor: 10.048

8.  Breadth-first search and its application to image processing problems.

Authors:  J Silvela; J Portillo
Journal:  IEEE Trans Image Process       Date:  2001       Impact factor: 10.856

9.  Regional ventilation during spontaneous breathing and mechanical ventilation in dogs.

Authors:  R D Hubmayr; J R Rodarte; B J Walters; F M Tonelli
Journal:  J Appl Physiol (1985)       Date:  1987-12

10.  Effect of body orientation on regional lung expansion in dog and sloth.

Authors:  E A Hoffman; E L Ritman
Journal:  J Appl Physiol (1985)       Date:  1985-08
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  32 in total

1.  Aortic valve prosthesis tracking for transapical aortic valve implantation.

Authors:  M E Karar; D R Merk; C Chalopin; T Walther; V Falk; O Burgert
Journal:  Int J Comput Assist Radiol Surg       Date:  2010-09-16       Impact factor: 2.924

2.  4DCT-based measurement of changes in pulmonary function following a course of radiation therapy.

Authors:  Kai Ding; John E Bayouth; John M Buatti; Gary E Christensen; Joseph M Reinhardt
Journal:  Med Phys       Date:  2010-03       Impact factor: 4.071

3.  Computerized assessment of pulmonary fissure integrity using high resolution CT.

Authors:  Jiantao Pu; Carl Fuhrman; Janet Durick; Joseph K Leader; Amy Klym; Frank C Sciurba; David Gur
Journal:  Med Phys       Date:  2010-09       Impact factor: 4.071

4.  Automatic lung lobe segmentation using particles, thin plate splines, and maximum a posteriori estimation.

Authors:  James C Ross; Rail San José Estépar; Gordon Kindlmann; Alejandro Díaz; Carl-Fredrik Westin; Edwin K Silverman; George R Washko
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

5.  Lung lobar slippage assessed with the aid of image registration.

Authors:  Youbing Yin; Eric A Hoffman; Ching-Long Lin
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

6.  An official research policy statement of the American Thoracic Society/European Respiratory Society: standards for quantitative assessment of lung structure.

Authors:  Connie C W Hsia; Dallas M Hyde; Matthias Ochs; Ewald R Weibel
Journal:  Am J Respir Crit Care Med       Date:  2010-02-15       Impact factor: 21.405

7.  Computer-aided diagnosis systems for lung cancer: challenges and methodologies.

Authors:  Ayman El-Baz; Garth M Beache; Georgy Gimel'farb; Kenji Suzuki; Kazunori Okada; Ahmed Elnakib; Ahmed Soliman; Behnoush Abdollahi
Journal:  Int J Biomed Imaging       Date:  2013-01-29

8.  Pulmonary lobe segmentation based on ridge surface sampling and shape model fitting.

Authors:  James C Ross; Gordon L Kindlmann; Yuka Okajima; Hiroto Hatabu; Alejandro A Díaz; Edwin K Silverman; George R Washko; Jennifer Dy; Raúl San José Estépar
Journal:  Med Phys       Date:  2013-12       Impact factor: 4.071

9.  Pulmonary Lobe Segmentation With Probabilistic Segmentation of the Fissures and a Groupwise Fissure Prior.

Authors:  Felix J S Bragman; Jamie R McClelland; Joseph Jacob; John R Hurst; David J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  2017-04-18       Impact factor: 10.048

10.  Fast and adaptive detection of pulmonary nodules in thoracic CT images using a hierarchical vector quantization scheme.

Authors:  Hao Han; Lihong Li; Fangfang Han; Bowen Song; William Moore; Zhengrong Liang
Journal:  IEEE J Biomed Health Inform       Date:  2014-06-04       Impact factor: 5.772

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