Literature DB >> 16353371

Matching and anatomical labeling of human airway tree.

Juerg Tschirren1, Geoffrey McLennan, Kálmán Palágyi, Eric A Hoffman, Milan Sonka.   

Abstract

Matching of corresponding branchpoints between two human airway trees, as well as assigning anatomical names to the segments and branchpoints of the human airway tree, are of significant interest for clinical applications and physiological studies. In the past, these tasks were often performed manually due to the lack of automated algorithms that can tolerate false branches and anatomical variability typical for in vivo trees. In this paper, we present algorithms that perform both matching of branchpoints and anatomical labeling of in vivo trees without any human intervention and within a short computing time. No hand-pruning of false branches is required. The results from the automated methods show a high degree of accuracy when validated against reference data provided by human experts. 92.9% of the verifiable branchpoint matches found by the computer agree with experts' results. For anatomical labeling, 97.1% of the automatically assigned segment labels were found to be correct.

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Year:  2005        PMID: 16353371      PMCID: PMC2077841          DOI: 10.1109/TMI.2005.857653

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  3 in total

1.  Automated anatomical labeling of the bronchial branch and its application to the virtual bronchoscopy system.

Authors:  K Mori; J Hasegawa; Y Suenaga; J Toriwaki
Journal:  IEEE Trans Med Imaging       Date:  2000-02       Impact factor: 10.048

2.  Quantitative analysis of intrathoracic airway trees: methods and validation.

Authors:  Kálmán Palágyi; Juerg Tschirren; Milan Sonka
Journal:  Inf Process Med Imaging       Date:  2003-07

3.  Measurement of three-dimensional lung tree structures by using computed tomography.

Authors:  S A Wood; E A Zerhouni; J D Hoford; E A Hoffman; W Mitzner
Journal:  J Appl Physiol (1985)       Date:  1995-11
  3 in total
  46 in total

Review 1.  Lung imaging in asthmatic patients: the picture is clearer.

Authors:  Mario Castro; Sean B Fain; Eric A Hoffman; David S Gierada; Serpil C Erzurum; Sally Wenzel
Journal:  J Allergy Clin Immunol       Date:  2011-06-02       Impact factor: 10.793

2.  The DIADEM metric: comparing multiple reconstructions of the same neuron.

Authors:  Todd A Gillette; Kerry M Brown; Giorgio A Ascoli
Journal:  Neuroinformatics       Date:  2011-09

Review 3.  State of the Art. A structural and functional assessment of the lung via multidetector-row computed tomography: phenotyping chronic obstructive pulmonary disease.

Authors:  Eric A Hoffman; Brett A Simon; Geoffrey McLennan
Journal:  Proc Am Thorac Soc       Date:  2006-08

4.  Characteristics of the turbulent laryngeal jet and its effect on airflow in the human intra-thoracic airways.

Authors:  Ching-Long Lin; Merryn H Tawhai; Geoffrey McLennan; Eric A Hoffman
Journal:  Respir Physiol Neurobiol       Date:  2007-02-14       Impact factor: 1.931

Review 5.  Functional imaging: CT and MRI.

Authors:  Edwin J R van Beek; Eric A Hoffman
Journal:  Clin Chest Med       Date:  2008-03       Impact factor: 2.878

6.  Comparison of airway diameter measurements from an anthropomorphic airway tree phantom using hyperpolarized 3He MRI and high-resolution computed tomography.

Authors:  Yang-Sheng Tzeng; Eric Hoffman; Janice Cook-Granroth; Rie Maurer; Niral Shah; Joey Mansour; Juerg Tschirren; Mitchell Albert
Journal:  Magn Reson Med       Date:  2007-09       Impact factor: 4.668

Review 7.  CT based computerized identification and analysis of human airways: a review.

Authors:  Jiantao Pu; Suicheng Gu; Shusen Liu; Shaocheng Zhu; David Wilson; Jill M Siegfried; David Gur
Journal:  Med Phys       Date:  2012-05       Impact factor: 4.071

8.  An automated self-similarity analysis of the pulmonary tree of the Sprague-Dawley rat.

Authors:  Daniel R Einstein; Blazej Neradilak; Nayak Pollisar; Kevin R Minard; Chris Wallis; Michelle Fanucchi; James P Carson; Andrew P Kuprat; Senthil Kabilan; Richard E Jacob; Richard A Corley
Journal:  Anat Rec (Hoboken)       Date:  2008-12       Impact factor: 2.064

9.  Genetic ancestry and the relationship of cigarette smoking to lung function and per cent emphysema in four race/ethnic groups: a cross-sectional study.

Authors:  Rhea Powell; Duncan Davidson; Jasmin Divers; Ani Manichaikul; J Jeffrey Carr; Robert Detrano; Eric A Hoffman; Rui Jiang; Richard A Kronmal; Kiang Liu; Naresh M Punjabi; Eyal Shahar; Karol E Watson; Jerome I Rotter; Kent D Taylor; Stephen S Rich; R Graham Barr
Journal:  Thorax       Date:  2013-04-12       Impact factor: 9.139

10.  Percent emphysema, airflow obstruction, and impaired left ventricular filling.

Authors:  R Graham Barr; David A Bluemke; Firas S Ahmed; J Jeffery Carr; Paul L Enright; Eric A Hoffman; Rui Jiang; Steven M Kawut; Richard A Kronmal; João A C Lima; Eyal Shahar; Lewis J Smith; Karol E Watson
Journal:  N Engl J Med       Date:  2010-01-21       Impact factor: 91.245

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