Literature DB >> 1918155

Three-dimensional reconstruction of the 70S Escherichia coli ribosome in ice: the distribution of ribosomal RNA.

J Frank1, P Penczek, R Grassucci, S Srivastava.   

Abstract

A reconstruction, at 40 A, of the Escherichia coli ribosome imaged by cryo-electron microscopy, obtained from 303 projections by a single-particle method of reconstruction, shows the two subunits with unprecedented clarity. In the interior of the subunits, a complex distribution of higher mass density is recognized, which is attributed to ribosomal RNA. The masses corresponding to the 16S and 23S components are linked in the region of the platform of the small subunit. Thus the topography of the rRNA regions responsible for protein synthesis can be described.

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Year:  1991        PMID: 1918155      PMCID: PMC2289182          DOI: 10.1083/jcb.115.3.597

Source DB:  PubMed          Journal:  J Cell Biol        ISSN: 0021-9525            Impact factor:   10.539


  42 in total

1.  Protein-induced conformational changes in 16 S ribosomal RNA during the initial assembly steps of the Escherichia coli 30 S ribosomal subunit.

Authors:  V Mandiyan; S Tumminia; J S Wall; J F Hainfeld; M Boublik
Journal:  J Mol Biol       Date:  1989-11-20       Impact factor: 5.469

2.  Ribosomal activity of the 16 S.23 S RNA complex.

Authors:  D P Burma; D S Tewari; A K Srivastava
Journal:  Arch Biochem Biophys       Date:  1985-06       Impact factor: 4.013

3.  Parameters for the preparation of Escherichia coli ribosomes and ribosomal subunits active in tRNA binding.

Authors:  H J Rheinberger; U Geigenmüller; M Wedde; K H Nierhaus
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

4.  Three-dimensional image reconstruction from ordered arrays of 70S ribosomes.

Authors:  T Arad; J Piefke; S Weinstein; H S Gewitz; A Yonath; H G Wittmann
Journal:  Biochimie       Date:  1987-09       Impact factor: 4.079

5.  Electron microscopy and computer image averaging of ice-embedded large ribosomal subunits from Escherichia coli.

Authors:  T Wagenknecht; R Grassucci; J Frank
Journal:  J Mol Biol       Date:  1988-01-05       Impact factor: 5.469

6.  Ion channel of acetylcholine receptor reconstructed from images of postsynaptic membranes.

Authors:  C Toyoshima; N Unwin
Journal:  Nature       Date:  1988-11-17       Impact factor: 49.962

Review 7.  Challenging the three-dimensional structure of ribosomes.

Authors:  A Yonath; H G Wittmann
Journal:  Trends Biochem Sci       Date:  1989-08       Impact factor: 13.807

8.  Model for the three-dimensional folding of 16 S ribosomal RNA.

Authors:  S Stern; B Weiser; H F Noller
Journal:  J Mol Biol       Date:  1988-11-20       Impact factor: 5.469

9.  Positions of S2, S13, S16, S17, S19 and S21 in the 30 S ribosomal subunit of Escherichia coli.

Authors:  M S Capel; M Kjeldgaard; D M Engelman; P B Moore
Journal:  J Mol Biol       Date:  1988-03-05       Impact factor: 5.469

10.  Computer averaging of electron micrographs of 40S ribosomal subunits.

Authors:  J Frank; A Verschoor; M Boublik
Journal:  Science       Date:  1981-12-18       Impact factor: 47.728

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  31 in total

1.  Three-dimensional structure of the Neisseria meningitidis secretin PilQ determined from negative-stain transmission electron microscopy.

Authors:  Richard F Collins; Robert C Ford; Ashraf Kitmitto; Ranveig O Olsen; Tone Tønjum; Jeremy P Derrick
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

2.  Three-dimensional structure of the truncated core of the Saccharomyces cerevisiae pyruvate dehydrogenase complex determined from negative stain and cryoelectron microscopy images.

Authors:  J K Stoops; T S Baker; J P Schroeter; S J Kolodziej; X D Niu; L J Reed
Journal:  J Biol Chem       Date:  1992-12-05       Impact factor: 5.157

3.  How are tRNAs and mRNA arranged in the ribosome? An attempt to correlate the stereochemistry of the tRNA-mRNA interaction with constraints imposed by the ribosomal topography.

Authors:  V Lim; C Venclovas; A Spirin; R Brimacombe; P Mitchell; F Müller
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

4.  Profile of Joachim Frank.

Authors:  Kaspar Mossman
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-04       Impact factor: 11.205

5.  The process of mRNA-tRNA translocation.

Authors:  Joachim Frank; Haixiao Gao; Jayati Sengupta; Ning Gao; Derek J Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-14       Impact factor: 11.205

Review 6.  Retrospective on the early development of cryoelectron microscopy of macromolecules and a prospective on opportunities for the future.

Authors:  Kenneth A Taylor; Robert M Glaeser
Journal:  J Struct Biol       Date:  2008-06-19       Impact factor: 2.867

7.  Modeling large RNAs and ribonucleoprotein particles using molecular mechanics techniques.

Authors:  A Malhotra; R K Tan; S C Harvey
Journal:  Biophys J       Date:  1994-06       Impact factor: 4.033

8.  Stem-loop IV of 5S rRNA lies close to the peptidyltransferase center.

Authors:  O Dontsova; V Tishkov; S Dokudovskaya; A Bogdanov; T Döring; J Rinke-Appel; S Thamm; B Greuer; R Brimacombe
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

9.  The movement of tRNA through the ribosome.

Authors:  J Frank; R K Agrawal
Journal:  Biophys J       Date:  1998-01       Impact factor: 4.033

Review 10.  Methods and application of coherent X-ray diffraction imaging of noncrystalline particles.

Authors:  Masayoshi Nakasako; Amane Kobayashi; Yuki Takayama; Kenta Asakura; Mao Oide; Koji Okajima; Tomotaka Oroguchi; Masaki Yamamoto
Journal:  Biophys Rev       Date:  2020-03-16
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