Literature DB >> 3288761

Positions of S2, S13, S16, S17, S19 and S21 in the 30 S ribosomal subunit of Escherichia coli.

M S Capel1, M Kjeldgaard, D M Engelman, P B Moore.   

Abstract

Neutron scattering distance data are presented for 33 protein pairs in the 30 S ribosomal subunit from Escherichia coli, along with the methods used for measuring distances between its exchangeable components. When combined with prior data, these new results permit the positioning of S2, S13, S16, S17, S19 and S21 in the 30 S ribosomal subunit, completing the mapping of its proteins by neutron scattering. Comparisons with other data suggest that the neutron map is a reliable guide to the quaternary structure of the 30 S subunit.

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Year:  1988        PMID: 3288761     DOI: 10.1016/0022-2836(88)90334-8

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  22 in total

1.  Visualization of protein S1 within the 30S ribosomal subunit and its interaction with messenger RNA.

Authors:  J Sengupta; R K Agrawal; J Frank
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-02       Impact factor: 11.205

2.  How are tRNAs and mRNA arranged in the ribosome? An attempt to correlate the stereochemistry of the tRNA-mRNA interaction with constraints imposed by the ribosomal topography.

Authors:  V Lim; C Venclovas; A Spirin; R Brimacombe; P Mitchell; F Müller
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

3.  Selective isolation and detailed analysis of intra-RNA cross-links induced in the large ribosomal subunit of E. coli: a model for the tertiary structure of the tRNA binding domain in 23S RNA.

Authors:  P Mitchell; M Osswald; D Schueler; R Brimacombe
Journal:  Nucleic Acids Res       Date:  1990-08-11       Impact factor: 16.971

4.  Localization of a series of RNA-protein cross-link sites in the 23S and 5S ribosomal RNA from Escherichia coli, induced by treatment of 50S subunits with three different bifunctional reagents.

Authors:  M Osswald; B Greuer; R Brimacombe
Journal:  Nucleic Acids Res       Date:  1990-12-11       Impact factor: 16.971

5.  Structural inference of native and partially folded RNA by high-throughput contact mapping.

Authors:  Rhiju Das; Madhuri Kudaravalli; Magdalena Jonikas; Alain Laederach; Robert Fong; Jason P Schwans; David Baker; Joseph A Piccirilli; Russ B Altman; Daniel Herschlag
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-05       Impact factor: 11.205

6.  Prediction of the three-dimensional structure of Escherichia coli 30S ribosomal subunit: a molecular mechanics approach.

Authors:  A Malhotra; R K Tan; S C Harvey
Journal:  Proc Natl Acad Sci U S A       Date:  1990-03       Impact factor: 11.205

7.  Modeling large RNAs and ribonucleoprotein particles using molecular mechanics techniques.

Authors:  A Malhotra; R K Tan; S C Harvey
Journal:  Biophys J       Date:  1994-06       Impact factor: 4.033

8.  Matching the crystallographic structure of ribosomal protein S7 to a three-dimensional model of the 16S ribosomal RNA.

Authors:  I Tanaka; A Nakagawa; H Hosaka; S Wakatsuki; F Mueller; R Brimacombe
Journal:  RNA       Date:  1998-05       Impact factor: 4.942

9.  From a structural average to the conformational ensemble of a DNA bulge.

Authors:  Xuesong Shi; Kyle A Beauchamp; Pehr B Harbury; Daniel Herschlag
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-31       Impact factor: 11.205

10.  Sequence comparison of new prokaryotic and mitochondrial members of the polypeptide chain release factor family predicts a five-domain model for release factor structure.

Authors:  H J Pel; M Rep; L A Grivell
Journal:  Nucleic Acids Res       Date:  1992-09-11       Impact factor: 16.971

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