Literature DB >> 2451023

Electron microscopy and computer image averaging of ice-embedded large ribosomal subunits from Escherichia coli.

T Wagenknecht1, R Grassucci, J Frank.   

Abstract

Electron micrographs of frozen-hydrated, large ribosomal subunits from Escherichia coli have been analyzed by computer image processing. Images of subunits in the so-called "crown" orientation were analyzed by correlation alignment procedures developed for negatively stained specimens. Averages of the aligned images showed both similarities and differences to averages determined for negatively stained specimens. The L1 ridge is more dense and stalk-like in frozen-hydrated as compared with negatively stained subunits, possibly because it is associated with ribosomal RNA. The results show that it should be feasible to determine the three-dimensional structure of the large ribosomal subunit from micrographs of individual, frozen-hydrated subunits that have been tilted in the electron microscope.

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Year:  1988        PMID: 2451023     DOI: 10.1016/0022-2836(88)90384-1

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  30 in total

1.  Electron tomography of frozen-hydrated isolated triad junctions.

Authors:  T Wagenknecht; C-E Hsieh; B K Rath; S Fleischer; M Marko
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

2.  Three-dimensional cryo-electron microscopy localization of EF2 in the Saccharomyces cerevisiae 80S ribosome at 17.5 A resolution.

Authors:  M G Gomez-Lorenzo; C M Spahn; R K Agrawal; R A Grassucci; P Penczek; K Chakraburtty; J P Ballesta; J L Lavandera; J F Garcia-Bustos; J Frank
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

3.  Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process.

Authors:  Mikel Valle; Jayati Sengupta; Neil K Swami; Robert A Grassucci; Nils Burkhardt; Knud H Nierhaus; Rajendra K Agrawal; Joachim Frank
Journal:  EMBO J       Date:  2002-07-01       Impact factor: 11.598

4.  Cryo-EM of the native structure of the calcium release channel/ryanodine receptor from sarcoplasmic reticulum.

Authors:  M Radermacher; T Wagenknecht; R Grassucci; J Frank; M Inui; C Chadwick; S Fleischer
Journal:  Biophys J       Date:  1992-04       Impact factor: 4.033

5.  Three-dimensional reconstruction of the ribosome from Escherichia coli.

Authors:  T Wagenknecht; J M Carazo; M Radermacher; J Frank
Journal:  Biophys J       Date:  1989-03       Impact factor: 4.033

6.  Genetic analysis of spirochete flagellin proteins and their involvement in motility, filament assembly, and flagellar morphology.

Authors:  Chunhao Li; Charles W Wolgemuth; Michael Marko; David G Morgan; Nyles W Charon
Journal:  J Bacteriol       Date:  2008-06-13       Impact factor: 3.490

7.  Structure of the E. coli protein-conducting channel bound to a translating ribosome.

Authors:  Kakoli Mitra; Christiane Schaffitzel; Tanvir Shaikh; Florence Tama; Simon Jenni; Charles L Brooks; Nenad Ban; Joachim Frank
Journal:  Nature       Date:  2005-11-17       Impact factor: 49.962

8.  Structural aspects of RbfA action during small ribosomal subunit assembly.

Authors:  Partha P Datta; Daniel N Wilson; Masahito Kawazoe; Neil K Swami; Tatsuya Kaminishi; Manjuli R Sharma; Timothy M Booth; Chie Takemoto; Paola Fucini; Shigeyuki Yokoyama; Rajendra K Agrawal
Journal:  Mol Cell       Date:  2007-11-09       Impact factor: 17.970

9.  Structural Basis for Gating and Activation of RyR1.

Authors:  Amédée des Georges; Oliver B Clarke; Ran Zalk; Qi Yuan; Kendall J Condon; Robert A Grassucci; Wayne A Hendrickson; Andrew R Marks; Joachim Frank
Journal:  Cell       Date:  2016-09-22       Impact factor: 41.582

10.  Cryoelectron microscopy of low density lipoprotein in vitreous ice.

Authors:  J M Spin; D Atkinson
Journal:  Biophys J       Date:  1995-05       Impact factor: 4.033

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