Literature DB >> 19153450

Crystallization and diffraction patterns of the oxy and cyano forms of the Lucina pectinata haemoglobins complex.

Carlos R Ruiz-Martínez1, Carlos A Nieves-Marrero, Rafael A Estremera-Andújar, José A Gavira, Luis A González-Ramírez, Juan López-Garriga, Juan M García-Ruiz.   

Abstract

The native oxygen-carrier haemoglobins complex (HbII-III) is composed of haemoglobin II (HbII) and haemoglobin III (HbIII), which are found in the ctenidia tissue of the bivalve mollusc Lucina pectinata. This protein complex was isolated and purified from its natural source and crystallized using the vapour-diffusion and capillary counter-diffusion methods. Oxy and cyano derivatives of the complex crystallized using several conditions, but the best crystals in terms of quality and size were obtained from sodium formate pH 5 using the counter-diffusion method in a single capillary. Crystals of the oxy and cyano complexes, which showed a ruby-red colour and nonsingular prismatic shapes, scattered X-rays to resolution limits of 2.15 and 2.20 A, respectively, using a 0.886 A synchrotron-radiation source. The crystals belonged to the tetragonal system, space group P4(2)2(1)2, with unit-cell parameters a = b = 74.07, c = 152.07 and a = b = 73.83, c = 152.49 A for the oxy and cyano complexes, respectively. The asymmetric unit of both crystals is composed of a single copy of the heterodimer, with Matthew coefficients (V(M)) of 3.08 and 3.06 A(3) Da(-1) for the oxy and cyano complexes, respectively, which correspond to a solvent content of approximately 60.0% by volume.

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Year:  2008        PMID: 19153450      PMCID: PMC2628858          DOI: 10.1107/S1744309108038542

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  18 in total

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Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

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Journal:  Proteins       Date:  2003-06-01

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4.  Capillary crystallization and molecular-replacement solution of haemoglobin II from the clam Lucina pectinata.

Authors:  José A Gavira; Walleska de Jesus; Ana Camara-Artigas; Juan López-Garriga; Juan M García-Ruiz
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-02-10

5.  Crystallization of a complex of hemoglobin components II and III of the symbiont-harboring clam Lucina pectinata.

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Journal:  J Mol Biol       Date:  1991-12-05       Impact factor: 5.469

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Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Hemoglobins of the Lucina pectinata/bacteria symbiosis. I. Molecular properties, kinetics and equilibria of reactions with ligands.

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Journal:  J Biol Chem       Date:  1990-09-25       Impact factor: 5.157

8.  Hemoglobin I from Lucina pectinata: a model for distal heme-ligand control.

Authors:  Ruth Pietri; Ruth G León; Laurent Kiger; Michael C Marden; Laura B Granell; Carmen L Cadilla; Juan López-Garriga
Journal:  Biochim Biophys Acta       Date:  2005-12-12

9.  Structure and ligand selection of hemoglobin II from Lucina pectinata.

Authors:  José A Gavira; Ana Camara-Artigas; Walleska De Jesús-Bonilla; Juan López-Garriga; Ariel Lewis; Ruth Pietri; Syun-Ru Yeh; Carmen L Cadilla; Juan Manuel García-Ruiz
Journal:  J Biol Chem       Date:  2008-01-18       Impact factor: 5.157

10.  The cDNA-derived amino acid sequence of hemoglobin II from Lucina pectinata.

Authors:  Elineth Torres-Mercado; Jessicca Y Renta; Yolanda Rodríguez; Juan López-Garriga; Carmen L Cadilla
Journal:  J Protein Chem       Date:  2003-11
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  4 in total

1.  Two-step counterdiffusion protocol for the crystallization of haemoglobin II from Lucina pectinata in the pH range 4-9.

Authors:  Carlos A Nieves-Marrero; Carlos R Ruiz-Martínez; Rafael A Estremera-Andújar; Luis A González-Ramírez; Juan López-Garriga; José A Gavira
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-02-24

2.  Lucina pectinata oxyhemoglobin (II-III) heterodimer pH susceptibility.

Authors:  Darya Marchany-Rivera; Clyde A Smith; Josiris D Rodriguez-Perez; Juan López-Garriga
Journal:  J Inorg Biochem       Date:  2020-03-07       Impact factor: 4.155

3.  SAXS structure of homodimeric oxyHemoglobin III from bivalve Lucina pectinata.

Authors:  Darya Marchany-Rivera; Rafael A Estremera-Andújar; Carlos Nieves-Marrero; Carlos R Ruiz-Martínez; William Bauer; Juan López-Garriga
Journal:  Biopolymers       Date:  2021-04-01       Impact factor: 2.240

4.  Characterization and Expression of the Lucina pectinata Oxygen and Sulfide Binding Hemoglobin Genes.

Authors:  Ingrid M Montes-Rodríguez; Linda E Rivera; Juan López-Garriga; Carmen L Cadilla
Journal:  PLoS One       Date:  2016-01-29       Impact factor: 3.240

  4 in total

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