Literature DB >> 16380302

Hemoglobin I from Lucina pectinata: a model for distal heme-ligand control.

Ruth Pietri1, Ruth G León, Laurent Kiger, Michael C Marden, Laura B Granell, Carmen L Cadilla, Juan López-Garriga.   

Abstract

Lucina pectinata hemoglobin I (HbI), which is a ferric sulfide-reactive hemeprotein, contains a distal pocket characterized by the presence of GlnE7 and PheB10. To elucidate the structural-functional properties of HbI, oxygen binding kinetics and FTIR studies with recombinant HbI (rHbI) and a set of mutants were conducted using CO and CN- as sensors of the hemeprotein environment. Three nuCO modes were observed for rHbI at 1936 cm(-1) (A3, closed conformer) 1950 cm(-1) (A1,2, closed conformer) and 1960 cm(-1) (A0, open conformer). These nuCO were affected by substitution of GlnE7 and PheB10 in the CO complexes. The contribution of GlnE7 is demonstrated when this residue is replaced with Asn, Val or His. For instance, decreasing the positive electrostatic environment with GlnE7Val, causes an increase of 65% in the population of A0 and the disappearance and 55% reduction of the population of the A1,2 and A3 respectively. The contribution of PheB10 to the stabilization of ligands is also observed in the Leu and Tyr mutants. The PheB10Leu mutation produced an 8% decrease in the population of the A3 conformer while that of the A1,2 configuration increased by 30%. This suggests that GlnE7 and PheB10 contribute to the A3 conformer stabilizing the CO in a closed configuration. With CN- as probe no substantial differences in the nuCN was observed upon substitution of GlnE7 by Val while a slight down shift in the nuCN from 2120 cm(-1) to 2117 cm(-1) was observed in the PheB10Leu mutant. This implies that in HbICN GlnE7 moves away from the binding site while PheB10 remains in the vicinity of the bound CN-. Here, a mechanism in which the flexibility of the distal protein matrix coupled with hemeporphyrin movement toward a different configuration is suggested as an important process in the H2S transport and delivery in hemoglobin I.

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Year:  2005        PMID: 16380302     DOI: 10.1016/j.bbapap.2005.11.006

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  12 in total

1.  Crystallization and diffraction patterns of the oxy and cyano forms of the Lucina pectinata haemoglobins complex.

Authors:  Carlos R Ruiz-Martínez; Carlos A Nieves-Marrero; Rafael A Estremera-Andújar; José A Gavira; Luis A González-Ramírez; Juan López-Garriga; Juan M García-Ruiz
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-12-25

Review 2.  Hydrogen sulfide and hemeproteins: knowledge and mysteries.

Authors:  Ruth Pietri; Elddie Román-Morales; Juan López-Garriga
Journal:  Antioxid Redox Signal       Date:  2011-04-08       Impact factor: 8.401

3.  Recombinant hemoglobin II from Lucina pectinata: a large-scale method for hemeprotein expression in E. coli.

Authors:  Cacimar Ramos; Ruth Pietri; Wilmarie Lorenzo; Elddie Roman; Laura B Granell; Carmen L Cadilla; Juan López-Garriga
Journal:  Protein J       Date:  2010-02       Impact factor: 2.371

4.  Fluoride binding to characteristic heme-pocket centers: Insights into ligand stability.

Authors:  Kaitlyn Frankenfield; Darya Marchany-Rivera; Kayla G Flanders; Anthony Cruz-Balberdy; Juan Lopez-Garriga; Jose F Cerda
Journal:  J Inorg Biochem       Date:  2021-08-17       Impact factor: 4.155

5.  Structure and ligand selection of hemoglobin II from Lucina pectinata.

Authors:  José A Gavira; Ana Camara-Artigas; Walleska De Jesús-Bonilla; Juan López-Garriga; Ariel Lewis; Ruth Pietri; Syun-Ru Yeh; Carmen L Cadilla; Juan Manuel García-Ruiz
Journal:  J Biol Chem       Date:  2008-01-18       Impact factor: 5.157

Review 6.  Chemical Biology of H2S Signaling through Persulfidation.

Authors:  Milos R Filipovic; Jasmina Zivanovic; Beatriz Alvarez; Ruma Banerjee
Journal:  Chem Rev       Date:  2017-11-07       Impact factor: 60.622

Review 7.  Hydrogen sulfide activation in hemeproteins: the sulfheme scenario.

Authors:  Bessie B Ríos-González; Elddie M Román-Morales; Ruth Pietri; Juan López-Garriga
Journal:  J Inorg Biochem       Date:  2014-01-25       Impact factor: 4.155

8.  Factors controlling the reactivity of hydrogen sulfide with hemeproteins.

Authors:  Ruth Pietri; Ariel Lewis; Ruth G León; Gullermina Casabona; Laurent Kiger; Syun-Ru Yeh; Sebastian Fernandez-Alberti; Michael C Marden; Carmen L Cadilla; Juan López-Garriga
Journal:  Biochemistry       Date:  2009-06-09       Impact factor: 3.162

9.  Lucina pectinata oxyhemoglobin (II-III) heterodimer pH susceptibility.

Authors:  Darya Marchany-Rivera; Clyde A Smith; Josiris D Rodriguez-Perez; Juan López-Garriga
Journal:  J Inorg Biochem       Date:  2020-03-07       Impact factor: 4.155

10.  Effects of active site mutations in haemoglobin I from Lucina pectinata: a molecular dynamic study.

Authors:  Eunice Ramirez; Anthony Cruz; Diana Rodriguez; Lilen Uchima; Ruth Pietri; Alberto Santana; Juan López-Garriga; Gustavo E López
Journal:  Mol Simul       Date:  2008-08-22       Impact factor: 2.178

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