Literature DB >> 19122145

Direct imaging of human Rad51 nucleoprotein dynamics on individual DNA molecules.

Jovencio Hilario1, Ichiro Amitani, Ronald J Baskin, Stephen C Kowalczykowski.   

Abstract

Rad51 protein (Rad51) is central to recombinational repair of double-strand DNA breaks. It polymerizes onto DNA and promotes strand exchange between homologous chromosomes. We visualized the real-time assembly and disassembly of human Rad51 nucleoprotein filaments on double-stranded DNA by single-molecule fluorescence microscopy. Rad51 assembly extends the DNA by approximately 65%. Nucleoprotein filament formation occurs via rapid nucleation followed by growth from these nuclei. Growth does not continue indefinitely, however, and nucleoprotein filaments terminate when approximately 2 mum in length. The dependence of nascent filament formation on Rad51 concentration suggests that 2-3 Rad51 monomers are involved in nucleation. Rad51 nucleoprotein filaments are stable and remain extended when ATP hydrolysis is prevented; however, when permitted, filaments decrease in length as a result of conversion to ADP-bound nucleoprotein complexes and partial protein dissociation. Dissociation of Rad51 from dsDNA is slow and incomplete, thereby rationalizing the need for other proteins that facilitate disassembly.

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Year:  2009        PMID: 19122145      PMCID: PMC2613362          DOI: 10.1073/pnas.0811965106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  45 in total

1.  RadA protein from Archaeoglobus fulgidus forms rings, nucleoprotein filaments and catalyses homologous recombination.

Authors:  M J McIlwraith; D R Hall; A Z Stasiak; A Stasiak; D B Wigley; S C West
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

Review 2.  Molecular views of recombination proteins and their control.

Authors:  Stephen C West
Journal:  Nat Rev Mol Cell Biol       Date:  2003-06       Impact factor: 94.444

3.  A molecular throttle: the recombination hotspot chi controls DNA translocation by the RecBCD helicase.

Authors:  Maria Spies; Piero R Bianco; Mark S Dillingham; Naofumi Handa; Ronald J Baskin; Stephen C Kowalczykowski
Journal:  Cell       Date:  2003-09-05       Impact factor: 41.582

4.  RecBCD enzyme switches lead motor subunits in response to chi recognition.

Authors:  Maria Spies; Ichiro Amitani; Ronald J Baskin; Stephen C Kowalczykowski
Journal:  Cell       Date:  2007-11-16       Impact factor: 41.582

Review 5.  Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda.

Authors:  A Kuzminov
Journal:  Microbiol Mol Biol Rev       Date:  1999-12       Impact factor: 11.056

6.  Archaeal RadA protein binds DNA as both helical filaments and octameric rings.

Authors:  S Yang; X Yu; E M Seitz; S C Kowalczykowski; E H Egelman
Journal:  J Mol Biol       Date:  2001-12-14       Impact factor: 5.469

7.  Rad54 protein stimulates heteroduplex DNA formation in the synaptic phase of DNA strand exchange via specific interactions with the presynaptic Rad51 nucleoprotein filament.

Authors:  J A Solinger; G Lutz; T Sugiyama; S C Kowalczykowski; W D Heyer
Journal:  J Mol Biol       Date:  2001-04-13       Impact factor: 5.469

Review 8.  Role of RAD52 epistasis group genes in homologous recombination and double-strand break repair.

Authors:  Lorraine S Symington
Journal:  Microbiol Mol Biol Rev       Date:  2002-12       Impact factor: 11.056

9.  Rad54, a Swi2/Snf2-like recombinational repair protein, disassembles Rad51:dsDNA filaments.

Authors:  Jachen A Solinger; Konstantin Kiianitsa; Wolf-Dietrich Heyer
Journal:  Mol Cell       Date:  2002-11       Impact factor: 17.970

10.  Conformational changes modulate the activity of human RAD51 protein.

Authors:  Yilun Liu; Alicja Z Stasiak; Jean-Yves Masson; Michael J McIlwraith; Andrzej Stasiak; Stephen C West
Journal:  J Mol Biol       Date:  2004-04-02       Impact factor: 5.469

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  75 in total

Review 1.  Single-molecule views of protein movement on single-stranded DNA.

Authors:  Taekjip Ha; Alexander G Kozlov; Timothy M Lohman
Journal:  Annu Rev Biophys       Date:  2012-02-23       Impact factor: 12.981

2.  RAD51 protein ATP cap regulates nucleoprotein filament stability.

Authors:  Ravindra Amunugama; Yujiong He; Smaranda Willcox; Robert A Forties; Kang-Sup Shim; Ralf Bundschuh; Yu Luo; Jack Griffith; Richard Fishel
Journal:  J Biol Chem       Date:  2012-01-24       Impact factor: 5.157

3.  Gene expression profiling of in Moniezia expansa at different developmental proglottids using cDNA microarray.

Authors:  Xinwen Bo; Wenjuan Zhao; Hui Zhang; Lichao Kang; Xinhua Wang
Journal:  Mol Biol Rep       Date:  2011-10-16       Impact factor: 2.316

4.  Crystal structure of the phage T4 recombinase UvsX and its functional interaction with the T4 SF2 helicase UvsW.

Authors:  Stefan Gajewski; Michael R Webb; Vitold Galkin; Edward H Egelman; Kenneth N Kreuzer; Stephen W White
Journal:  J Mol Biol       Date:  2010-10-28       Impact factor: 5.469

5.  Kinetics of presynaptic filament assembly in the presence of single-stranded DNA binding protein and recombination mediator protein.

Authors:  Jie Liu; Christopher L Berger; Scott W Morrical
Journal:  Biochemistry       Date:  2013-10-30       Impact factor: 3.162

6.  Structural transitions within human Rad51 nucleoprotein filaments.

Authors:  Ragan B Robertson; Dana N Moses; YoungHo Kwon; Pamela Chan; Peter Chi; Hannah Klein; Patrick Sung; Eric C Greene
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-21       Impact factor: 11.205

7.  Nascent DNA synthesis during homologous recombination is synergistically promoted by the rad51 recombinase and DNA homology.

Authors:  Maureen M Mundia; Vatsal Desai; Alissa C Magwood; Mark D Baker
Journal:  Genetics       Date:  2014-02-28       Impact factor: 4.562

Review 8.  Single molecule techniques in DNA repair: a primer.

Authors:  Craig D Hughes; Michelle Simons; Cassidy E Mackenzie; Bennett Van Houten; Neil M Kad
Journal:  DNA Repair (Amst)       Date:  2014-05-10

9.  Cryo-EM structures of human RAD51 recombinase filaments during catalysis of DNA-strand exchange.

Authors:  Jingfei Xu; Lingyun Zhao; Yuanyuan Xu; Weixing Zhao; Patrick Sung; Hong-Wei Wang
Journal:  Nat Struct Mol Biol       Date:  2016-12-12       Impact factor: 15.369

10.  BRCA2: Shining light on the regulation of DNA-binding selectivity by RAD51.

Authors:  Aura Carreira; Stephen C Kowalczykowski
Journal:  Cell Cycle       Date:  2009-11-06       Impact factor: 4.534

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