Literature DB >> 11713300

RadA protein from Archaeoglobus fulgidus forms rings, nucleoprotein filaments and catalyses homologous recombination.

M J McIlwraith1, D R Hall, A Z Stasiak, A Stasiak, D B Wigley, S C West.   

Abstract

Proteins that catalyse homologous recombination have been identified in all living organisms and are essential for the repair of damaged DNA as well as for the generation of genetic diversity. In bacteria homologous recombination is performed by the RecA protein, whereas in the eukarya a related protein called Rad51 is required to catalyse recombination and repair. More recently, archaeal homologues of RecA/Rad51 (RadA) have been identified and isolated. In this work we have cloned and purified the RadA protein from the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus and characterised its in vitro activities. We show that (i) RadA protein forms ring structures in solution and binds single- but not double-stranded DNA to form nucleoprotein filaments, (ii) RadA is a single-stranded DNA-dependent ATPase at elevated temperatures, and (iii) RadA catalyses efficient D-loop formation and strand exchange at temperatures of 60-70 degrees C. Finally, we have used electron microscopy to visualise RadA-mediated joint molecules, the intermediates of homologous recombination. Intriguingly, RadA shares properties of both the bacterial RecA and eukaryotic Rad51 recombinases.

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Year:  2001        PMID: 11713300      PMCID: PMC92570          DOI: 10.1093/nar/29.22.4509

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  60 in total

1.  The importance of repairing stalled replication forks.

Authors:  M M Cox; M F Goodman; K N Kreuzer; D J Sherratt; S J Sandler; K J Marians
Journal:  Nature       Date:  2000-03-02       Impact factor: 49.962

2.  Rings and filaments of beta protein from bacteriophage lambda suggest a superfamily of recombination proteins.

Authors:  S I Passy; X Yu; Z Li; C M Radding; E H Egelman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

3.  The human Rad52 protein exists as a heptameric ring.

Authors:  A Z Stasiak; E Larquet; A Stasiak; S Müller; A Engel; E Van Dyck; S C West; E H Egelman
Journal:  Curr Biol       Date:  2000-03-23       Impact factor: 10.834

4.  Efficient strand transfer by the RadA recombinase from the hyperthermophilic archaeon Desulfurococcus amylolyticus.

Authors:  Y V Kil; D M Baitin; R Masui; E A Bonch-Osmolovskaya; S Kuramitsu; V A Lanzov
Journal:  J Bacteriol       Date:  2000-01       Impact factor: 3.490

Review 5.  Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae.

Authors:  F Pâques; J E Haber
Journal:  Microbiol Mol Biol Rev       Date:  1999-06       Impact factor: 11.056

6.  Heteroduplex formation by human Rad51 protein: effects of DNA end-structure, hRP-A and hRad52.

Authors:  P Baumann; S C West
Journal:  J Mol Biol       Date:  1999-08-13       Impact factor: 5.469

7.  The meiosis-specific recombinase hDmc1 forms ring structures and interacts with hRad51.

Authors:  J Y Masson; A A Davies; N Hajibagheri; E Van Dyck; F E Benson; A Z Stasiak; A Stasiak; S C West
Journal:  EMBO J       Date:  1999-11-15       Impact factor: 11.598

8.  The RadA protein from a hyperthermophilic archaeon Pyrobaculum islandicum is a DNA-dependent ATPase that exhibits two disparate catalytic modes, with a transition temperature at 75 degrees C.

Authors:  M Spies; Y Kil; R Masui; R Kato; C Kujo; T Ohshima; S Kuramitsu; V Lanzov
Journal:  Eur J Biochem       Date:  2000-02

9.  Visualisation of human rad52 protein and its complexes with hRad51 and DNA.

Authors:  E Van Dyck; N M Hajibagheri; A Stasiak; S C West
Journal:  J Mol Biol       Date:  1998-12-11       Impact factor: 5.469

10.  Catalysis of ATP-dependent homologous DNA pairing and strand exchange by yeast RAD51 protein.

Authors:  P Sung
Journal:  Science       Date:  1994-08-26       Impact factor: 47.728

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  17 in total

1.  Two distinct modes of RecA action are required for DNA polymerase V-catalyzed translesion synthesis.

Authors:  Phuong Pham; Erica M Seitz; Sergei Saveliev; Xuan Shen; Roger Woodgate; Michael M Cox; Myron F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-12       Impact factor: 11.205

2.  Discontinuity and limited linkage in the homologous recombination system of a hyperthermophilic archaeon.

Authors:  Dennis W Grogan; Jananie Rockwood
Journal:  J Bacteriol       Date:  2010-07-19       Impact factor: 3.490

3.  Long-distance lateral diffusion of human Rad51 on double-stranded DNA.

Authors:  Annette Granéli; Caitlyn C Yeykal; Ragan B Robertson; Eric C Greene
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

4.  Direct imaging of human Rad51 nucleoprotein dynamics on individual DNA molecules.

Authors:  Jovencio Hilario; Ichiro Amitani; Ronald J Baskin; Stephen C Kowalczykowski
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-02       Impact factor: 11.205

5.  Structure of a filament of stacked octamers of human DMC1 recombinase.

Authors:  Liqin Du; Yu Luo
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-03-28

6.  Fission yeast rad51 and dmc1, two efficient DNA recombinases forming helical nucleoprotein filaments.

Authors:  Synthia Sauvageau; Alicja Z Stasiak; Isabelle Banville; Mickaël Ploquin; Andrzej Stasiak; Jean-Yves Masson
Journal:  Mol Cell Biol       Date:  2005-06       Impact factor: 4.272

7.  Swi5-Sfr1 stimulates Rad51 recombinase filament assembly by modulating Rad51 dissociation.

Authors:  Chih-Hao Lu; Hsin-Yi Yeh; Guan-Chin Su; Kentaro Ito; Yumiko Kurokawa; Hiroshi Iwasaki; Peter Chi; Hung-Wen Li
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-08       Impact factor: 11.205

8.  Structure of a hexameric form of RadA recombinase from Methanococcus voltae.

Authors:  Liqin Du; Yu Luo
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-04-20

9.  An archaeal Rad54 protein remodels DNA and stimulates DNA strand exchange by RadA.

Authors:  Cynthia A Haseltine; Stephen C Kowalczykowski
Journal:  Nucleic Acids Res       Date:  2009-03-12       Impact factor: 16.971

10.  Target molecular simulations of RecA family protein filaments.

Authors:  Zhi-Yuan Su; Wen-Jay Lee; Wan-Sheng Su; Yeng-Tseng Wang
Journal:  Int J Mol Sci       Date:  2012-06-11       Impact factor: 6.208

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