Literature DB >> 27941862

Cryo-EM structures of human RAD51 recombinase filaments during catalysis of DNA-strand exchange.

Jingfei Xu1, Lingyun Zhao1, Yuanyuan Xu2, Weixing Zhao2, Patrick Sung2, Hong-Wei Wang1.   

Abstract

The central step in eukaryotic homologous recombination (HR) is ATP-dependent DNA-strand exchange mediated by the Rad51 recombinase. In this process, Rad51 assembles on single-stranded DNA (ssDNA) and generates a helical filament that is able to search for and invade homologous double-stranded DNA (dsDNA), thus leading to strand separation and formation of new base pairs between the initiating ssDNA and the complementary strand within the duplex. Here, we used cryo-EM to solve the structures of human RAD51 in complex with DNA molecules, in presynaptic and postsynaptic states, at near-atomic resolution. Our structures reveal both conserved and distinct structural features of the human RAD51-DNA complexes compared with their prokaryotic counterpart. Notably, we also captured the structure of an arrested synaptic complex. Our results provide new insight into the molecular mechanisms of the DNA homology search and strand-exchange processes.

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Year:  2016        PMID: 27941862      PMCID: PMC5471492          DOI: 10.1038/nsmb.3336

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  63 in total

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2.  FREALIGN: high-resolution refinement of single particle structures.

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Journal:  J Struct Biol       Date:  2006-06-02       Impact factor: 2.867

3.  Direct observation of individual RecA filaments assembling on single DNA molecules.

Authors:  Roberto Galletto; Ichiro Amitani; Ronald J Baskin; Stephen C Kowalczykowski
Journal:  Nature       Date:  2006-09-20       Impact factor: 49.962

4.  Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures.

Authors:  Zhucheng Chen; Haijuan Yang; Nikola P Pavletich
Journal:  Nature       Date:  2008-05-22       Impact factor: 49.962

5.  Activities of human recombination protein Rad51.

Authors:  R C Gupta; L R Bazemore; E I Golub; C M Radding
Journal:  Proc Natl Acad Sci U S A       Date:  1997-01-21       Impact factor: 11.205

6.  Hydrogen-bonding networks and RNA bases revealed by cryo electron microscopy suggest a triggering mechanism for calcium switches.

Authors:  Peng Ge; Z Hong Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-17       Impact factor: 11.205

7.  The mouse and human homologs of DMC1, the yeast meiosis-specific homologous recombination gene, have a common unique form of exon-skipped transcript in meiosis.

Authors:  T Habu; T Taki; A West; Y Nishimune; T Morita
Journal:  Nucleic Acids Res       Date:  1996-02-01       Impact factor: 16.971

8.  Rad51 is an accessory factor for Dmc1-mediated joint molecule formation during meiosis.

Authors:  Veronica Cloud; Yuen-Ling Chan; Jennifer Grubb; Brian Budke; Douglas K Bishop
Journal:  Science       Date:  2012-09-07       Impact factor: 47.728

9.  Regulation of Rad51 function by phosphorylation.

Authors:  Sonja Flott; Youngho Kwon; Ying Zhang Pigli; Phoebe A Rice; Patrick Sung; Stephen P Jackson
Journal:  EMBO Rep       Date:  2011-07-08       Impact factor: 8.807

10.  RecA homology search is promoted by mechanical stress along the scanned duplex DNA.

Authors:  Claudia Danilowicz; Efraim Feinstein; Alyson Conover; Vincent W Coljee; Julea Vlassakis; Yuen-Ling Chan; Douglas K Bishop; Mara Prentiss
Journal:  Nucleic Acids Res       Date:  2011-10-19       Impact factor: 16.971

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  41 in total

1.  The identification of key genes in nasopharyngeal carcinoma by bioinformatics analysis of high-throughput data.

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Journal:  Mol Biol Rep       Date:  2019-03-04       Impact factor: 2.316

Review 2.  RAD51 Gene Family Structure and Function.

Authors:  Braulio Bonilla; Sarah R Hengel; McKenzie K Grundy; Kara A Bernstein
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3.  Demystifying the D-loop during DNA recombination.

Authors:  Upasana Roy; Eric C Greene
Journal:  Nature       Date:  2020-10       Impact factor: 49.962

4.  Rad54 and Rdh54 occupy spatially and functionally distinct sites within the Rad51-ssDNA presynaptic complex.

Authors:  J Brooks Crickard; Youngho Kwon; Patrick Sung; Eric C Greene
Journal:  EMBO J       Date:  2020-08-13       Impact factor: 11.598

5.  Dynamic interactions of the homologous pairing 2 (Hop2)-meiotic nuclear divisions 1 (Mnd1) protein complex with meiotic presynaptic filaments in budding yeast.

Authors:  J Brooks Crickard; Youngho Kwon; Patrick Sung; Eric C Greene
Journal:  J Biol Chem       Date:  2018-11-12       Impact factor: 5.157

6.  Regulation of Hed1 and Rad54 binding during maturation of the meiosis-specific presynaptic complex.

Authors:  J Brooks Crickard; Kyle Kaniecki; YoungHo Kwon; Patrick Sung; Michael Lisby; Eric C Greene
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Review 7.  The BRCA Tumor Suppressor Network in Chromosome Damage Repair by Homologous Recombination.

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Journal:  Annu Rev Biochem       Date:  2019-03-27       Impact factor: 23.643

Review 8.  Repair of DNA double-strand breaks in plant meiosis: role of eukaryotic RecA recombinases and their modulators.

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Journal:  Plant Reprod       Date:  2022-06-01       Impact factor: 3.767

9.  Observation and Analysis of RAD51 Nucleation Dynamics at Single-Monomer Resolution.

Authors:  Shyamal Subramanyam; Colin D Kinz-Thompson; Ruben L Gonzalez; Maria Spies
Journal:  Methods Enzymol       Date:  2018-02-01       Impact factor: 1.600

Review 10.  To "Z" or not to "Z": Z-RNA, self-recognition, and the MDA5 helicase.

Authors:  Alan Herbert
Journal:  PLoS Genet       Date:  2021-05-13       Impact factor: 5.917

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