Literature DB >> 19668224

Cryo-electron tomography of bacteria: progress, challenges and future prospects.

Jacqueline L S Milne1, Sriram Subramaniam.   

Abstract

Recent advances in three-dimensional electron microscopy provide remarkable tools to image the interior of bacterial cells. Glimpses of cells at resolutions that are 1-2 orders of magnitude higher than those currently attained with light microscopy can now be obtained with cryo-electron tomography, especially when used in combination with new tools for image averaging. This Review highlights recent advances in this area and provides an assessment of the general applicability, current limitations and type of structural information that can be obtained about the organization of intact cells using tomography. Possible future directions for whole cell imaging are also discussed.

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Year:  2009        PMID： 19668224      PMCID： PMC6993139          DOI： 10.1038/nrmicro2183

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN： 1740-1526            Impact factor:   60.633


  87 in total

Review 1.  Cryo-electron microscopy of vitreous sections.

Authors:  Ashraf Al-Amoudi; Jiin-Ju Chang; Amélie Leforestier; Alasdair McDowall; Laurée Michel Salamin; Lars P O Norlén; Karsten Richter; Nathalie Sartori Blanc; Daniel Studer; Jacques Dubochet
Journal:  EMBO J       Date:  2004-08-19       Impact factor: 11.598

Review 2.  Novel techniques in electron microscopy.

Authors:  Richard D Leapman
Journal:  Curr Opin Neurobiol       Date:  2004-10       Impact factor: 6.627

3.  Cell surface filaments of the gliding bacterium Flavobacterium johnsoniae revealed by cryo-electron tomography.

Authors:  Jun Liu; Mark J McBride; Sriram Subramaniam
Journal:  J Bacteriol       Date:  2007-08-10       Impact factor: 3.490

4.  On the feasibility of visualizing ultrasmall gold labels in biological specimens by STEM tomography.

Authors:  A A Sousa; M A Aronova; Y C Kim; L M Dorward; G Zhang; R D Leapman
Journal:  J Struct Biol       Date:  2007-06-28       Impact factor: 2.867

5.  Role of HAMP domains in chemotaxis signaling by bacterial chemoreceptors.

Authors:  Cezar M Khursigara; Xiongwu Wu; Peijun Zhang; Jonathan Lefman; Sriram Subramaniam
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-21       Impact factor: 11.205

6.  Native cellular architecture of Treponema denticola revealed by cryo-electron tomography.

Authors:  Jacques Izard; Chyong-Ere Hsieh; Ronald J Limberger; Carmen A Mannella; Michael Marko
Journal:  J Struct Biol       Date:  2008-03-28       Impact factor: 2.867

7.  Structural analysis of Mycoplasma pneumoniae by cryo-electron tomography.

Authors:  Anja Seybert; Richard Herrmann; Achilleas S Frangakis
Journal:  J Struct Biol       Date:  2006-05-07       Impact factor: 2.867

8.  Determination of the inelastic mean free path in ice by examination of tilted vesicles and automated most probable loss imaging.

Authors:  R Grimm; D Typke; M Bärmann; W Baumeister
Journal:  Ultramicroscopy       Date:  1996-07       Impact factor: 2.689

9.  Three-dimensional electron microscopic imaging of membrane invaginations in Escherichia coli overproducing the chemotaxis receptor Tsr.

Authors:  Jonathan Lefman; Peijun Zhang; Teruhisa Hirai; Robert M Weis; Jemma Juliani; Donald Bliss; Martin Kessel; Erik Bos; Peter J Peters; Sriram Subramaniam
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

10.  3D imaging of mammalian cells with ion-abrasion scanning electron microscopy.

Authors:  Jurgen A W Heymann; Dan Shi; Sang Kim; Donald Bliss; Jacqueline L S Milne; Sriram Subramaniam
Journal:  J Struct Biol       Date:  2008-12-10       Impact factor: 2.867
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  52 in total

Review 1.  The ParMRC system: molecular mechanisms of plasmid segregation by actin-like filaments.

Authors:  Jeanne Salje; Pananghat Gayathri; Jan Löwe
Journal:  Nat Rev Microbiol       Date:  2010-10       Impact factor: 60.633

Review 2.  Cell biology of prokaryotic organelles.

Authors:  Dorothee Murat; Meghan Byrne; Arash Komeili
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-08-25       Impact factor: 10.005

3.  3D visualization of HIV transfer at the virological synapse between dendritic cells and T cells.

Authors:  Richard L Felts; Kedar Narayan; Jacob D Estes; Dan Shi; Charles M Trubey; Jing Fu; Lisa M Hartnell; Gordon T Ruthel; Douglas K Schneider; Kunio Nagashima; Julian W Bess; Sina Bavari; Bradley C Lowekamp; Donald Bliss; Jeffrey D Lifson; Sriram Subramaniam
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-12       Impact factor: 11.205

Review 4.  Minicells, Back in Fashion.

Authors:  Madeline M Farley; Bo Hu; William Margolin; Jun Liu
Journal:  J Bacteriol       Date:  2016-03-31       Impact factor: 3.490

5.  Structural diversity of bacterial flagellar motors.

Authors:  Songye Chen; Morgan Beeby; Gavin E Murphy; Jared R Leadbetter; David R Hendrixson; Ariane Briegel; Zhuo Li; Jian Shi; Elitza I Tocheva; Axel Müller; Megan J Dobro; Grant J Jensen
Journal:  EMBO J       Date:  2011-06-14       Impact factor: 11.598

6.  Lateral density of receptor arrays in the membrane plane influences sensitivity of the E. coli chemotaxis response.

Authors:  Cezar M Khursigara; Ganhui Lan; Silke Neumann; Xiongwu Wu; Suchie Ravindran; Mario J Borgnia; Victor Sourjik; Jacqueline Milne; Yuhai Tu; Sriram Subramaniam
Journal:  EMBO J       Date:  2011-03-25       Impact factor: 11.598

7.  Iron-reducing bacteria accumulate ferric oxyhydroxide nanoparticle aggregates that may support planktonic growth.

Authors:  Birgit Luef; Sirine C Fakra; Roseann Csencsits; Kelly C Wrighton; Kenneth H Williams; Michael J Wilkins; Kenneth H Downing; Philip E Long; Luis R Comolli; Jillian F Banfield
Journal:  ISME J       Date:  2012-10-04       Impact factor: 10.302

8.  High-gradient nanomagnets on cantilevers for sensitive detection of nuclear magnetic resonance.

Authors:  Jonilyn G Longenecker; H J Mamin; Alexander W Senko; Lei Chen; Charles T Rettner; Daniel Rugar; John A Marohn
Journal:  ACS Nano       Date:  2012-10-10       Impact factor: 15.881

9.  Cryo-electron tomography of the magnetotactic vibrio Magnetovibrio blakemorei: insights into the biomineralization of prismatic magnetosomes.

Authors:  Fernanda Abreu; Alioscka A Sousa; Maria A Aronova; Youngchan Kim; Daniel Cox; Richard D Leapman; Leonardo R Andrade; Bechara Kachar; Dennis A Bazylinski; Ulysses Lins
Journal:  J Struct Biol       Date:  2012-12-12       Impact factor: 2.867

10.  Structural remodeling of bacteriophage T4 and host membranes during infection initiation.

Authors:  Bo Hu; William Margolin; Ian J Molineux; Jun Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205
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