Literature DB >> 19064258

A highly structured, nuclease-resistant, noncoding RNA produced by flaviviruses is required for pathogenicity.

Gorben P Pijlman1, Anneke Funk, Natasha Kondratieva, Jason Leung, Shessy Torres, Lieke van der Aa, Wen Jun Liu, Ann C Palmenberg, Pei-Yong Shi, Roy A Hall, Alexander A Khromykh.   

Abstract

Viral noncoding RNAs have been shown to play an important role in virus-host interplay to facilitate virus replication. We report that members of the genus Flavivirus, a large group of medically important encephalitic RNA viruses, produce a unique and highly structured noncoding RNA of 0.3-0.5 kb derived from the 3' untranslated region of the viral genome. Using West Nile virus as a model, we show that this subgenomic RNA is a product of incomplete degradation of viral genomic RNA by cellular ribonucleases. Highly conserved RNA structures located at the beginning of the 3' untranslated region render this RNA resistant to nucleases, and the resulting subgenomic RNA product is essential for virus-induced cytopathicity and pathogenicity. Thus, flaviviruses evolved a unique strategy to generate a noncoding RNA product that allows them to kill the host more efficiently.

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Year:  2008        PMID: 19064258     DOI: 10.1016/j.chom.2008.10.007

Source DB:  PubMed          Journal:  Cell Host Microbe        ISSN: 1931-3128            Impact factor:   21.023


  238 in total

1.  Composition of the sequence downstream of the dengue virus 5' cyclization sequence (dCS) affects viral RNA replication.

Authors:  Peter Friebe; José Peña; Marie O F Pohl; Eva Harris
Journal:  Virology       Date:  2011-12-01       Impact factor: 3.616

2.  A common strategy for host RNA degradation by divergent viruses.

Authors:  Marta Maria Gaglia; Sergio Covarrubias; Wesley Wong; Britt A Glaunsinger
Journal:  J Virol       Date:  2012-06-27       Impact factor: 5.103

Review 3.  Noncoding RNPs of viral origin.

Authors:  Joan Steitz; Sumit Borah; Demian Cazalla; Victor Fok; Robin Lytle; Rachel Mitton-Fry; Kasandra Riley; Tasleem Samji
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-03-01       Impact factor: 10.005

4.  Identification of multiple RIG-I-specific pathogen associated molecular patterns within the West Nile virus genome and antigenome.

Authors:  Jennifer German Shipley; Rianna Vandergaast; Lu Deng; Roy A Mariuzza; Brenda L Fredericksen
Journal:  Virology       Date:  2012-07-07       Impact factor: 3.616

5.  Knotty Zika Virus Blocks Exonuclease to Produce Subgenomic Flaviviral RNAs.

Authors:  Nandan S Gokhale; Stacy M Horner
Journal:  Cell Host Microbe       Date:  2017-01-11       Impact factor: 21.023

6.  cis-Acting Sequences and Secondary Structures in Untranslated Regions of Duck Tembusu Virus RNA Are Important for Cap-Independent Translation and Viral Proliferation.

Authors:  Tao Wang; Andres Merits; Yuanyuan Wu; Mingshu Wang; Renyong Jia; Dekang Zhu; Mafeng Liu; Xinxin Zhao; Qiao Yang; Ying Wu; Shaqiu Zhang; Yunya Liu; Ling Zhang; Yanling Yu; Leichang Pan; Shun Chen; Anchun Cheng
Journal:  J Virol       Date:  2020-07-30       Impact factor: 5.103

Review 7.  Flavivirus RNA synthesis in vitro.

Authors:  Radhakrishnan Padmanabhan; Ratree Takhampunya; Tadahisa Teramoto; Kyung H Choi
Journal:  Methods       Date:  2015-08-10       Impact factor: 3.608

8.  Noncoding flavivirus RNA displays RNA interference suppressor activity in insect and Mammalian cells.

Authors:  Esther Schnettler; Mark G Sterken; Jason Y Leung; Stefan W Metz; Corinne Geertsema; Rob W Goldbach; Just M Vlak; Alain Kohl; Alexander A Khromykh; Gorben P Pijlman
Journal:  J Virol       Date:  2012-10-03       Impact factor: 5.103

9.  Viral manipulation of host mRNA decay.

Authors:  Liang Guo; Irina Vlasova-St Louis; Paul R Bohjanen
Journal:  Future Virol       Date:  2018-02-23       Impact factor: 1.831

10.  MicroRNA-like viral small RNA from Dengue virus 2 autoregulates its replication in mosquito cells.

Authors:  Mazhar Hussain; Sassan Asgari
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-03       Impact factor: 11.205

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