Literature DB >> 28081439

Knotty Zika Virus Blocks Exonuclease to Produce Subgenomic Flaviviral RNAs.

Nandan S Gokhale1, Stacy M Horner2.   

Abstract

In a recent issue of Science, Akiyama et al. (2016) prove the existence of a pseudoknot that stabilizes a nuclease-resistant RNA structure in the 3' untranslated region of Zika virus. This reinforced structure blocks the 5'→3' exonuclease Xrn1 for the production of pathogenic subgenomic flaviviral RNAs.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  RNA structure; Xrn1; Zika virus; sfRNA; xrRNA

Mesh：

Substances：

Year:  2017        PMID： 28081439      PMCID： PMC6123830          DOI： 10.1016/j.chom.2016.12.013

Source DB:  PubMed          Journal:  Cell Host Microbe        ISSN： 1931-3128            Impact factor:   21.023


  10 in total

1.  A highly structured, nuclease-resistant, noncoding RNA produced by flaviviruses is required for pathogenicity.

Authors:  Gorben P Pijlman; Anneke Funk; Natasha Kondratieva; Jason Leung; Shessy Torres; Lieke van der Aa; Wen Jun Liu; Ann C Palmenberg; Pei-Yong Shi; Roy A Hall; Alexander A Khromykh
Journal:  Cell Host Microbe       Date:  2008-12-11       Impact factor: 21.023

2.  Noncoding Subgenomic Flavivirus RNA Is Processed by the Mosquito RNA Interference Machinery and Determines West Nile Virus Transmission by Culex pipiens Mosquitoes.

Authors:  G P Göertz; J J Fros; P Miesen; C B F Vogels; M L van der Bent; C Geertsema; C J M Koenraadt; R P van Rij; M M van Oers; G P Pijlman
Journal:  J Virol       Date:  2016-10-28       Impact factor: 5.103

3.  Zika virus produces noncoding RNAs using a multi-pseudoknot structure that confounds a cellular exonuclease.

Authors:  Benjamin M Akiyama; Hannah M Laurence; Aaron R Massey; David A Costantino; Xuping Xie; Yujiao Yang; Pei-Yong Shi; Jay C Nix; J David Beckham; Jeffrey S Kieft
Journal:  Science       Date:  2016-11-10       Impact factor: 47.728

Review 4.  Zika virus - reigniting the TORCH.

Authors:  Carolyn B Coyne; Helen M Lazear
Journal:  Nat Rev Microbiol       Date:  2016-08-30       Impact factor: 60.633

5.  Dengue virus RNA structure specialization facilitates host adaptation.

Authors:  Sergio M Villordo; Claudia V Filomatori; Irma Sánchez-Vargas; Carol D Blair; Andrea V Gamarnik
Journal:  PLoS Pathog       Date:  2015-01-30       Impact factor: 6.823

Review 6.  New hypotheses derived from the structure of a flaviviral Xrn1-resistant RNA: Conservation, folding, and host adaptation.

Authors:  Jeffrey S Kieft; Jennifer L Rabe; Erich G Chapman
Journal:  RNA Biol       Date:  2015-09-23       Impact factor: 4.652

7.  Full Genome Sequence and sfRNA Interferon Antagonist Activity of Zika Virus from Recife, Brazil.

Authors:  Claire L Donald; Benjamin Brennan; Stephanie L Cumberworth; Veronica V Rezelj; Jordan J Clark; Marli T Cordeiro; Rafael Freitas de Oliveira França; Lindomar J Pena; Gavin S Wilkie; Ana Da Silva Filipe; Christopher Davis; Joseph Hughes; Margus Varjak; Martin Selinger; Luíza Zuvanov; Ania M Owsianka; Arvind H Patel; John McLauchlan; Brett D Lindenbach; Gamou Fall; Amadou A Sall; Roman Biek; Jan Rehwinkel; Esther Schnettler; Alain Kohl
Journal:  PLoS Negl Trop Dis       Date:  2016-10-05

8.  The structural basis of pathogenic subgenomic flavivirus RNA (sfRNA) production.

Authors:  Erich G Chapman; David A Costantino; Jennifer L Rabe; Stephanie L Moon; Jeffrey Wilusz; Jay C Nix; Jeffrey S Kieft
Journal:  Science       Date:  2014-04-18       Impact factor: 47.728

9.  RNA structures that resist degradation by Xrn1 produce a pathogenic Dengue virus RNA.

Authors:  Erich G Chapman; Stephanie L Moon; Jeffrey Wilusz; Jeffrey S Kieft
Journal:  Elife       Date:  2014-04-01       Impact factor: 8.140

Review 10.  Viral RNA pseudoknots: versatile motifs in gene expression and replication.

Authors:  Ian Brierley; Simon Pennell; Robert J C Gilbert
Journal:  Nat Rev Microbiol       Date:  2007-08       Impact factor: 60.633
  10 in total
  4 in total

1.  Short Direct Repeats in the 3' Untranslated Region Are Involved in Subgenomic Flaviviral RNA Production.

Authors:  Qiu-Yan Zhang; Xiao-Feng Li; Xiaolin Niu; Na Li; Hong-Jiang Wang; Cheng-Lin Deng; Han-Qing Ye; Xing-Yao Huang; Qi Chen; Yan-Peng Xu; Hao-Long Dong; Xiao-Dan Li; Hui Zhao; Pei-Yong Shi; Zhi-Ming Yuan; Peng Gong; Xianyang Fang; Cheng-Feng Qin; Bo Zhang
Journal:  J Virol       Date:  2020-02-28       Impact factor: 5.103

Review 2.  RNA regulatory processes in RNA virus biology.

Authors:  Shaun T Cross; Daniel Michalski; Megan R Miller; Jeffrey Wilusz
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-04-29       Impact factor: 9.957

Review 3.  Universal RNA Secondary Structure Insight Into Mosquito-Borne Flavivirus (MBFV) cis-Acting RNA Biology.

Authors:  Miao Zeng; Yanping Duan; Wei Zhang; Mingshu Wang; Renyong Jia; Dekang Zhu; Mafeng Liu; Xinxin Zhao; Qiao Yang; Ying Wu; Shaqiu Zhang; Yunya Liu; Ling Zhang; Yangling Yu; Shun Chen; Anchun Cheng
Journal:  Front Microbiol       Date:  2020-03-27       Impact factor: 5.640

4.  Cellular 5'-3' mRNA Exoribonuclease XRN1 Inhibits Interferon Beta Activation and Facilitates Influenza A Virus Replication.

Authors:  Yen-Chin Liu; Bobo Wing-Yee Mok; Pui Wang; Rei-Lin Kuo; Honglin Chen; Shin-Ru Shih
Journal:  mBio       Date:  2021-07-27       Impact factor: 7.867
  4 in total

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