Literature DB >> 19008917

The evolution of biology. A shift towards the engineering of prediction-generating tools and away from traditional research practice.

Lawrence Kelley1, Michael Scott.   

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Year:  2008        PMID： 19008917      PMCID： PMC2603458          DOI： 10.1038/embor.2008.212

Source DB:  PubMed          Journal:  EMBO Rep        ISSN： 1469-221X            Impact factor:   8.807


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  18 in total

1.  The PSIPRED protein structure prediction server.

Authors:  L J McGuffin; K Bryson; D T Jones
Journal:  Bioinformatics       Date:  2000-04       Impact factor: 6.937

2.  Surviving a knockout blow.

Authors:  Helen Pearson
Journal:  Nature       Date:  2002-01-03       Impact factor: 49.962

Review 3.  Molecular chaperones in the cytosol: from nascent chain to folded protein.

Authors:  F Ulrich Hartl; Manajit Hayer-Hartl
Journal:  Science       Date:  2002-03-08       Impact factor: 47.728

Review 4.  Reverse engineering of biological complexity.

Authors:  Marie E Csete; John C Doyle
Journal:  Science       Date:  2002-03-01       Impact factor: 47.728

5.  Complexity in biological signaling systems.

Authors:  G Weng; U S Bhalla; R Iyengar
Journal:  Science       Date:  1999-04-02       Impact factor: 47.728

6.  Ligand selectivity and competition between enzymes in silico.

Authors:  Antonio Macchiarulo; Irene Nobeli; Janet M Thornton
Journal:  Nat Biotechnol       Date:  2004-08       Impact factor: 54.908

Review 7.  Conformational changes associated with protein-protein interactions.

Authors:  Chern-Sing Goh; Duncan Milburn; Mark Gerstein
Journal:  Curr Opin Struct Biol       Date:  2004-02       Impact factor: 6.809

8.  Reductionism and complexity in molecular biology. Scientists now have the tools to unravel biological and overcome the limitations of reductionism.

Authors:  Marc H V Van Regenmortel
Journal:  EMBO Rep       Date:  2004-11       Impact factor: 8.807

Review 9.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

10.  Alternative splicing and protein structure evolution.

Authors:  Fabian Birzele; Gergely Csaba; Ralf Zimmer
Journal:  Nucleic Acids Res       Date:  2007-11-30       Impact factor: 16.971
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  5 in total

1.  Darwinian evolution in the light of genomics.

Authors:  Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2009-02-12       Impact factor: 16.971

2.  Laws of biology: why so few?

Authors:  Pawan K Dhar; Alessandro Giuliani
Journal:  Syst Synth Biol       Date:  2009-12-29

3.  Basic research in HIV vaccinology is hampered by reductionist thinking.

Authors:  Marc H V Van Regenmortel
Journal:  Front Immunol       Date:  2012-07-09       Impact factor: 7.561

Review 4.  An Outdated Notion of Antibody Specificity is One of the Major Detrimental Assumptions of the Structure-Based Reverse Vaccinology Paradigm, Which Prevented It from Helping to Develop an Effective HIV-1 Vaccine.

Authors:  Marc H V Van Regenmortel
Journal:  Front Immunol       Date:  2014-11-18       Impact factor: 7.561

Review 5.  Structure-Based Reverse Vaccinology Failed in the Case of HIV Because it Disregarded Accepted Immunological Theory.

Authors:  Marc H V Van Regenmortel
Journal:  Int J Mol Sci       Date:  2016-09-21       Impact factor: 5.923
  5 in total

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