Literature DB >> 18995195

Prevalence scaling: applications to an intelligent workstation for the diagnosis of breast cancer.

Karla Horsch1, Maryellen L Giger, Charles E Metz.   

Abstract

RATIONALE AND
OBJECTIVES: Our goal was to investigate the effects of changes that the prevalence of cancer in a population have on the probability of malignancy (PM) output and an optimal combination of a true-positive fraction (TPF) and a false-positive fraction (FPF) of a mammographic and sonographic automatic classifier for the diagnosis of breast cancer.
MATERIALS AND METHODS: We investigate how a prevalence-scaling transformation that is used to change the prevalence inherent in the computer estimates of the PM affects the numerical and histographic output of a previously developed multimodality intelligent workstation. Using Bayes' rule and the binormal model, we study how changes in the prevalence of cancer in the diagnostic breast population affect our computer classifiers' optimal operating points, as defined by maximizing the expected utility.
RESULTS: Prevalence scaling affects the threshold at which a particular TPF and FPF pair is achieved. Tables giving the thresholds on the scaled PM estimates that result in particular pairs of TPF and FPF are presented. Histograms of PMs scaled to reflect clinically relevant prevalence values differ greatly from histograms of laboratory-designed PMs. The optimal pair (TPF, FPF) of our lower performing mammographic classifier is more sensitive to changes in clinical prevalence than that of our higher performing sonographic classifier.
CONCLUSIONS: Prevalence scaling can be used to change computer PM output to reflect clinically more appropriate prevalence. Relatively small changes in clinical prevalence can have large effects on the computer classifier's optimal operating point.

Entities:  

Mesh:

Year:  2008        PMID: 18995195      PMCID: PMC2921585          DOI: 10.1016/j.acra.2008.04.022

Source DB:  PubMed          Journal:  Acad Radiol        ISSN: 1076-6332            Impact factor:   3.173


  11 in total

1.  Computerized analysis of lesions in US images of the breast.

Authors:  M L Giger; H Al-Hallaq; Z Huo; C Moran; D E Wolverton; C W Chan; W Zhong
Journal:  Acad Radiol       Date:  1999-11       Impact factor: 3.173

2.  Computerized diagnosis of breast lesions on ultrasound.

Authors:  Karla Horsch; Maryellen L Giger; Luz A Venta; Carl J Vyborny
Journal:  Med Phys       Date:  2002-02       Impact factor: 4.071

3.  Ideal observer approximation using Bayesian classification neural networks.

Authors:  M A Kupinski; D C Edwards; M L Giger; C E Metz
Journal:  IEEE Trans Med Imaging       Date:  2001-09       Impact factor: 10.048

4.  Automatic segmentation of breast lesions on ultrasound.

Authors:  K Horsch; M L Giger; L A Venta; C J Vyborny
Journal:  Med Phys       Date:  2001-08       Impact factor: 4.071

5.  Basic principles of ROC analysis.

Authors:  C E Metz
Journal:  Semin Nucl Med       Date:  1978-10       Impact factor: 4.446

6.  Reader variability in mammography and its implications for expected utility over the population of readers and cases.

Authors:  Robert F Wagner; Craig A Beam; Sergey V Beiden
Journal:  Med Decis Making       Date:  2004 Nov-Dec       Impact factor: 2.583

7.  Classification of breast lesions with multimodality computer-aided diagnosis: observer study results on an independent clinical data set.

Authors:  Karla Horsch; Maryellen L Giger; Carl J Vyborny; Li Lan; Ellen B Mendelson; R Edward Hendrick
Journal:  Radiology       Date:  2006-08       Impact factor: 11.105

8.  Comparison of receiver operating characteristic curves on the basis of optimal operating points.

Authors:  E J Halpern; M Albert; A M Krieger; C E Metz; A D Maidment
Journal:  Acad Radiol       Date:  1996-03       Impact factor: 3.173

9.  Maximum likelihood estimation of receiver operating characteristic (ROC) curves from continuously-distributed data.

Authors:  C E Metz; B A Herman; J H Shen
Journal:  Stat Med       Date:  1998-05-15       Impact factor: 2.373

10.  Automated computerized classification of malignant and benign masses on digitized mammograms.

Authors:  Z Huo; M L Giger; C J Vyborny; D E Wolverton; R A Schmidt; K Doi
Journal:  Acad Radiol       Date:  1998-03       Impact factor: 3.173

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  8 in total

1.  External validation of a publicly available computer assisted diagnostic tool for mammographic mass lesions with two high prevalence research datasets.

Authors:  Matthias Benndorf; Elizabeth S Burnside; Christoph Herda; Mathias Langer; Elmar Kotter
Journal:  Med Phys       Date:  2015-08       Impact factor: 4.071

Review 2.  Anniversary paper: History and status of CAD and quantitative image analysis: the role of Medical Physics and AAPM.

Authors:  Maryellen L Giger; Heang-Ping Chan; John Boone
Journal:  Med Phys       Date:  2008-12       Impact factor: 4.071

3.  A scaling transformation for classifier output based on likelihood ratio: applications to a CAD workstation for diagnosis of breast cancer.

Authors:  Karla Horsch; Lorenzo L Pesce; Maryellen L Giger; Charles E Metz; Yulei Jiang
Journal:  Med Phys       Date:  2012-05       Impact factor: 4.071

4.  Semiparametric estimation of the relationship between ROC operating points and the test-result scale: application to the proper binormal model.

Authors:  Lorenzo L Pesce; Karla Horsch; Karen Drukker; Charles E Metz
Journal:  Acad Radiol       Date:  2011-12       Impact factor: 3.173

5.  Computerized assessment of breast lesion malignancy using DCE-MRI robustness study on two independent clinical datasets from two manufacturers.

Authors:  Weijie Chen; Maryellen L Giger; Gillian M Newstead; Ulrich Bick; Sanaz A Jansen; Hui Li; Li Lan
Journal:  Acad Radiol       Date:  2010-07       Impact factor: 3.173

6.  Performance metric curve analysis framework to assess impact of the decision variable threshold, disease prevalence, and dataset variability in two-class classification.

Authors:  Heather M Whitney; Karen Drukker; Maryellen L Giger
Journal:  J Med Imaging (Bellingham)       Date:  2022-05-31

7.  Improved Classification of Benign and Malignant Breast Lesions Using Deep Feature Maximum Intensity Projection MRI in Breast Cancer Diagnosis Using Dynamic Contrast-enhanced MRI.

Authors:  Qiyuan Hu; Heather M Whitney; Hui Li; Yu Ji; Peifang Liu; Maryellen L Giger
Journal:  Radiol Artif Intell       Date:  2021-02-24

8.  Calibration of medical diagnostic classifier scores to the probability of disease.

Authors:  Weijie Chen; Berkman Sahiner; Frank Samuelson; Aria Pezeshk; Nicholas Petrick
Journal:  Stat Methods Med Res       Date:  2016-08-08       Impact factor: 3.021

  8 in total

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