Literature DB >> 18982621

Comparison of EPI distortion correction methods in diffusion tensor MRI using a novel framework.

M Wu1, L C Chang, L Walker, H Lemaitre, A S Barnett, S Marenco, C Pierpaoli.   

Abstract

Diffusion weighted images (DWIs) are commonly acquired with Echo-planar imaging (EPI). B0 inhomogeneities affect EPI by producing spatially nonlinear image distortions. Several strategies have been proposed to correct EPI distortions including B0 field mapping (B0M) and image registration. In this study, an experimental framework is proposed to evaluation the performance of different EPI distortion correction methods in improving DT-derived quantities. A deformable registration based method with mutual information metric and cubic B-spline modeled constrained deformation field (BSP) is proposed as an alternative when B0 mapping data are not available. BSP method is qualitatively and quantitatively compared to B0M method using the framework. Both methods can successful reduce EPI distortions and significantly improve the quality of DT-derived quantities. Overall, B0M was clearly superior in infratentorial regions including brainstem and cerebellum, as well as in the ventral areas of the temporal lobes while BSP was better in all rostral brain regions.

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Year:  2008        PMID: 18982621      PMCID: PMC4819327          DOI: 10.1007/978-3-540-85990-1_39

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  11 in total

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Journal:  Magn Reson Med       Date:  1999-06       Impact factor: 4.668

2.  Unwarping of unidirectionally distorted EPI images.

Authors:  J Kybic; P Thévenaz; A Nirkko; M Unser
Journal:  IEEE Trans Med Imaging       Date:  2000-02       Impact factor: 10.048

3.  Optimized distortion correction technique for echo planar imaging.

Authors:  N K Chen ; A M Wyrwicz
Journal:  Magn Reson Med       Date:  2001-03       Impact factor: 4.668

4.  Accurate alignment of functional EPI data to anatomical MRI using a physics-based distortion model.

Authors:  C Studholme; R T Constable; J S Duncan
Journal:  IEEE Trans Med Imaging       Date:  2000-11       Impact factor: 10.048

5.  Quantitative comparison of AIR, SPM, and the fully deformable model for atlas-based segmentation of functional and structural MR images.

Authors:  Minjie Wu; Owen Carmichael; Pilar Lopez-Garcia; Cameron S Carter; Howard J Aizenstein
Journal:  Hum Brain Mapp       Date:  2006-09       Impact factor: 5.038

6.  Volumetric neuroimage analysis extensions for the MIPAV software package.

Authors:  Pierre-Louis Bazin; Jennifer L Cuzzocreo; Michael A Yassa; William Gandler; Matthew J McAuliffe; Susan S Bassett; Dzung L Pham
Journal:  J Neurosci Methods       Date:  2007-05-29       Impact factor: 2.390

7.  Correction for geometric distortion in echo planar images from B0 field variations.

Authors:  P Jezzard; R S Balaban
Journal:  Magn Reson Med       Date:  1995-07       Impact factor: 4.668

8.  Enhancement of MR images using registration for signal averaging.

Authors:  C J Holmes; R Hoge; L Collins; R Woods; A W Toga; A C Evans
Journal:  J Comput Assist Tomogr       Date:  1998 Mar-Apr       Impact factor: 1.826

9.  Estimation of the effective self-diffusion tensor from the NMR spin echo.

Authors:  P J Basser; J Mattiello; D LeBihan
Journal:  J Magn Reson B       Date:  1994-03

10.  Comprehensive approach for correction of motion and distortion in diffusion-weighted MRI.

Authors:  G K Rohde; A S Barnett; P J Basser; S Marenco; C Pierpaoli
Journal:  Magn Reson Med       Date:  2004-01       Impact factor: 4.668

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  64 in total

1.  Effects of image distortions originating from susceptibility variations and concomitant fields on diffusion MRI tractography results.

Authors:  M Okan Irfanoglu; Lindsay Walker; Joelle Sarlls; Stefano Marenco; Carlo Pierpaoli
Journal:  Neuroimage       Date:  2012-03-03       Impact factor: 6.556

2.  Correcting Susceptibility-Induced Distortion in Diffusion-Weighted MRI using Constrained Nonrigid Registration.

Authors:  Chitresh Bhushan; Justin P Haldar; Anand A Joshi; Richard M Leahy
Journal:  Signal Inf Process Assoc Annu Summit Conf APSIPA Asia Pac       Date:  2012-12

3.  Assessing the performance of different DTI motion correction strategies in the presence of EPI distortion correction.

Authors:  Paul A Taylor; A Alhamud; Andre van der Kouwe; Muhammad G Saleh; Barbara Laughton; Ernesta Meintjes
Journal:  Hum Brain Mapp       Date:  2016-07-20       Impact factor: 5.038

4.  Altered Human Memory Modification in the Presence of Normal Consolidation.

Authors:  Nitzan Censor; Ethan R Buch; Karim Nader; Leonardo G Cohen
Journal:  Cereb Cortex       Date:  2015-08-12       Impact factor: 5.357

5.  Informed RESTORE: A method for robust estimation of diffusion tensor from low redundancy datasets in the presence of physiological noise artifacts.

Authors:  Lin-Ching Chang; Lindsay Walker; Carlo Pierpaoli
Journal:  Magn Reson Med       Date:  2012-01-27       Impact factor: 4.668

6.  Image Registration to Compensate for EPI Distortion in Patients with Brain Tumors: An Evaluation of Tract-Specific Effects.

Authors:  Angela Albi; Antonio Meola; Fan Zhang; Pegah Kahali; Laura Rigolo; Chantal M W Tax; Pelin Aksit Ciris; Walid I Essayed; Prashin Unadkat; Isaiah Norton; Yogesh Rathi; Olutayo Olubiyi; Alexandra J Golby; Lauren J O'Donnell
Journal:  J Neuroimaging       Date:  2018-01-10       Impact factor: 2.486

7.  The diffusion tensor imaging (DTI) component of the NIH MRI study of normal brain development (PedsDTI).

Authors:  Lindsay Walker; Lin-Ching Chang; Amritha Nayak; M Okan Irfanoglu; Kelly N Botteron; James McCracken; Robert C McKinstry; Michael J Rivkin; Dah-Jyuu Wang; Judith Rumsey; Carlo Pierpaoli
Journal:  Neuroimage       Date:  2015-06-03       Impact factor: 6.556

8.  A quality assurance protocol for diffusion tensor imaging using the head phantom from American College of Radiology.

Authors:  Zhiyue J Wang; Youngseob Seo; Jonathan M Chia; Nancy K Rollins
Journal:  Med Phys       Date:  2011-07       Impact factor: 4.071

9.  Voxel-wise co-analysis of macro- and microstructural brain alteration in mild cognitive impairment and Alzheimer's disease using anatomical and diffusion MRI.

Authors:  Valerie A Cardenas; Duygu Tosun; Linda L Chao; P Thomas Fletcher; Sarang Joshi; Michael W Weiner; Norbert Schuff
Journal:  J Neuroimaging       Date:  2013-02-19       Impact factor: 2.486

10.  Diffusion tensor imaging in young children with autism: biological effects and potential confounds.

Authors:  Lindsay Walker; Marta Gozzi; Rhoshel Lenroot; Audrey Thurm; Babak Behseta; Susan Swedo; Carlo Pierpaoli
Journal:  Biol Psychiatry       Date:  2012-08-18       Impact factor: 13.382

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