Literature DB >> 18693849

Analysis of error concentrations in SNOMED.

Michael Halper1, Yue Wang, Hua Min, Yan Chen, George Hripcsak, Yehoshua Perl, Kent A Spackman.   

Abstract

Two high-level abstraction networks for the knowledge content of a terminology, known respectively as the "area taxonomy" and "p-area taxonomy," have previously been defined. Both are derived automatically from partitions of the terminology's concepts. An important application of these networks is in auditing, where a number of systematic regimens have been formulated utilizing them. In particular, the taxonomies tend to highlight certain kinds of concept groups where errors are more likely to be found. Using results garnered from applications of our auditing regimens to SNOMED CT, an investigation into the concentration of errors among such groups is carried out. Three hypotheses pertaining to the error distributions are put forth. The results support the fact that certain groups presented by the taxonomies show higher error percentages as compared to other groups. The bootstrap is used to assess their statistical significance. This knowledge will help direct auditing efforts to increase their impact.

Mesh:

Year:  2007        PMID: 18693849      PMCID: PMC2655786     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  4 in total

1.  Ontology-based error detection in SNOMED-CT.

Authors:  Werner Ceusters; Barry Smith; Anand Kumar; Christoffel Dhaen
Journal:  Stud Health Technol Inform       Date:  2004

2.  Mistakes in medical ontologies: where do they come from and how can they be detected?

Authors:  Werner Ceusters; Barry Smith; Anand Kumar; Christoffel Dhaen
Journal:  Stud Health Technol Inform       Date:  2004

3.  Structural methodologies for auditing SNOMED.

Authors:  Yue Wang; Michael Halper; Hua Min; Yehoshua Perl; Yan Chen; Kent A Spackman
Journal:  J Biomed Inform       Date:  2006-12-24       Impact factor: 6.317

4.  Auditing as part of the terminology design life cycle.

Authors:  Hua Min; Yehoshua Perl; Yan Chen; Michael Halper; James Geller; Yue Wang
Journal:  J Am Med Inform Assoc       Date:  2006-08-23       Impact factor: 4.497

  4 in total
  30 in total

1.  Using the abstraction network in complement to description logics for quality assurance in biomedical terminologies - a case study in SNOMED CT.

Authors:  Duo Wei; Olivier Bodenreider
Journal:  Stud Health Technol Inform       Date:  2010

2.  Auditing SNOMED relationships using a converse abstraction network.

Authors:  Duo Wei; Michael Halper; Gai Elhanan; Yan Chen; Yehoshua Perl; James Geller; Kent A Spackman
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

Review 3.  A review of auditing methods applied to the content of controlled biomedical terminologies.

Authors:  Xinxin Zhu; Jung-Wei Fan; David M Baorto; Chunhua Weng; James J Cimino
Journal:  J Biomed Inform       Date:  2009-03-12       Impact factor: 6.317

4.  Auditing the semantic completeness of SNOMED CT using formal concept analysis.

Authors:  Guoqian Jiang; Christopher G Chute
Journal:  J Am Med Inform Assoc       Date:  2008-10-24       Impact factor: 4.497

5.  Auditing complex concepts in overlapping subsets of SNOMED.

Authors:  Yue Wang; Duo Wei; Junchuan Xu; Gai Elhanan; Yehoshua Perl; Michael Halper; Yan Chen; Kent A Spackman; George Hripcsak
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

6.  Using the RxNorm web services API for quality assurance purposes.

Authors:  Lee Peters; Olivier Bodenreider
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

7.  Complexity measures to track the evolution of a SNOMED hierarchy.

Authors:  Duo Wei; Yue Wang; Yehoshua Perl; Junchuan Xu; Michael Halper; Kent A Spackman; Kent Spackman
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

8.  Quality assurance of chemical ingredient classification for the National Drug File - Reference Terminology.

Authors:  Ling Zheng; Hasan Yumak; Ling Chen; Christopher Ochs; James Geller; Joan Kapusnik-Uner; Yehoshua Perl
Journal:  J Biomed Inform       Date:  2017-07-16       Impact factor: 6.317

Review 9.  Introducing the Big Knowledge to Use (BK2U) challenge.

Authors:  Yehoshua Perl; James Geller; Michael Halper; Christopher Ochs; Ling Zheng; Joan Kapusnik-Uner
Journal:  Ann N Y Acad Sci       Date:  2016-10-17       Impact factor: 5.691

10.  Structural group-based auditing of missing hierarchical relationships in UMLS.

Authors:  Yan Chen; Huanying Helen Gu; Yehoshua Perl; James Geller
Journal:  J Biomed Inform       Date:  2008-08-20       Impact factor: 6.317

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