Literature DB >> 20351941

Auditing SNOMED relationships using a converse abstraction network.

Duo Wei1, Michael Halper, Gai Elhanan, Yan Chen, Yehoshua Perl, James Geller, Kent A Spackman.   

Abstract

In SNOMED CT, a given kind of attribute relationship is defined between two hierarchies, a source and a target. Certain hierarchies (or subhierarchies) serve only as targets, with no outgoing relationships of their own. However, converse relationships-those pointing in a direction opposite to the defined relationships-while not explicitly represented in SNOMED's inferred view, can be utilized in forming an alternative view of a source. In particular, they can help shed light on a source hierarchy's overall relationship structure. Toward this end, an abstraction network, called the converse abstraction network (CAN), derived automatically from a given SNOMED hierarchy is presented. An auditing methodology based on the CAN is formulated. The methodology is applied to SNOMED's Device subhierarchy and the related device relationships of the Procedure hierarchy. The results indicate that the CAN is useful in finding opportunities for refining and improving SNOMED.

Mesh:

Year:  2009        PMID: 20351941      PMCID: PMC2815489     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  5 in total

1.  Ontology-based error detection in SNOMED-CT.

Authors:  Werner Ceusters; Barry Smith; Anand Kumar; Christoffel Dhaen
Journal:  Stud Health Technol Inform       Date:  2004

2.  Structural methodologies for auditing SNOMED.

Authors:  Yue Wang; Michael Halper; Hua Min; Yehoshua Perl; Yan Chen; Kent A Spackman
Journal:  J Biomed Inform       Date:  2006-12-24       Impact factor: 6.317

3.  Auditing description-logic-based medical terminological systems by detecting equivalent concept definitions.

Authors:  Ronald Cornet; Ameen Abu-Hanna
Journal:  Int J Med Inform       Date:  2007-08-10       Impact factor: 4.046

4.  Analysis of error concentrations in SNOMED.

Authors:  Michael Halper; Yue Wang; Hua Min; Yan Chen; George Hripcsak; Yehoshua Perl; Kent A Spackman
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

5.  Auditing the semantic completeness of SNOMED CT using formal concept analysis.

Authors:  Guoqian Jiang; Christopher G Chute
Journal:  J Am Med Inform Assoc       Date:  2008-10-24       Impact factor: 4.497

  5 in total
  9 in total

1.  SNOMED CT revisions and coded data repositories: when to upgrade?

Authors:  Werner Ceusters
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

2.  Using the abstraction network in complement to description logics for quality assurance in biomedical terminologies - a case study in SNOMED CT.

Authors:  Duo Wei; Olivier Bodenreider
Journal:  Stud Health Technol Inform       Date:  2010

3.  Dissimilarities in the Logical Modeling of Apparently Similar Concepts in SNOMED CT.

Authors:  Ankur Agrawal; Gai Elhanan; Michael Halper
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

4.  A comparative analysis of the density of the SNOMED CT conceptual content for semantic harmonization.

Authors:  Zhe He; James Geller; Yan Chen
Journal:  Artif Intell Med       Date:  2015-04-02       Impact factor: 5.326

5.  A tribal abstraction network for SNOMED CT target hierarchies without attribute relationships.

Authors:  Christopher Ochs; James Geller; Yehoshua Perl; Yan Chen; Ankur Agrawal; James T Case; George Hripcsak
Journal:  J Am Med Inform Assoc       Date:  2014-10-20       Impact factor: 4.497

6.  Abstraction of complex concepts with a refined partial-area taxonomy of SNOMED.

Authors:  Yue Wang; Michael Halper; Duo Wei; Yehoshua Perl; James Geller
Journal:  J Biomed Inform       Date:  2011-08-25       Impact factor: 6.317

Review 7.  Auditing complex concepts of SNOMED using a refined hierarchical abstraction network.

Authors:  Yue Wang; Michael Halper; Duo Wei; Huanying Gu; Yehoshua Perl; Junchuan Xu; Gai Elhanan; Yan Chen; Kent A Spackman; James T Case; George Hripcsak
Journal:  J Biomed Inform       Date:  2011-09-01       Impact factor: 6.317

8.  Structural measures to track the evolution of SNOMED CT hierarchies.

Authors:  Duo Wei; Huanying Helen Gu; Yehoshua Perl; Michael Halper; Christopher Ochs; Gai Elhanan; Yan Chen
Journal:  J Biomed Inform       Date:  2015-08-07       Impact factor: 6.317

9.  Structural Patterns under X-Rays: Is SNOMED CT Growing Straight?

Authors:  Pablo López-García; Stefan Schulz
Journal:  PLoS One       Date:  2016-11-03       Impact factor: 3.240

  9 in total

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