Literature DB >> 17276736

Structural methodologies for auditing SNOMED.

Yue Wang1, Michael Halper, Hua Min, Yehoshua Perl, Yan Chen, Kent A Spackman.   

Abstract

SNOMED is one of the leading health care terminologies being used worldwide. As such, quality assurance is an important part of its maintenance cycle. Methodologies for auditing SNOMED based on structural aspects of its organization are presented. In particular, automated techniques for partitioning SNOMED into smaller groups of concepts based primarily on relationships patterns are defined. Two abstraction networks, the area taxonomy and p-area taxonomy, are derived from the partitions. The high-level views afforded by these abstraction networks form the basis for systematic auditing. The networks tend to highlight errors that manifest themselves as irregularities at the abstract level. They also support group-based auditing, where sets of purportedly similar concepts are focused on for review. The auditing methodologies are demonstrated on one of SNOMED's top-level hierarchies. Errors discovered during the auditing process are reported.

Mesh:

Year:  2006        PMID: 17276736     DOI: 10.1016/j.jbi.2006.12.003

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  54 in total

1.  Using the abstraction network in complement to description logics for quality assurance in biomedical terminologies - a case study in SNOMED CT.

Authors:  Duo Wei; Olivier Bodenreider
Journal:  Stud Health Technol Inform       Date:  2010

2.  Auditing SNOMED relationships using a converse abstraction network.

Authors:  Duo Wei; Michael Halper; Gai Elhanan; Yan Chen; Yehoshua Perl; James Geller; Kent A Spackman
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

3.  Auditing consistency and usefulness of LOINC use among three large institutions - using version spaces for grouping LOINC codes.

Authors:  M C Lin; D J Vreeman; Clement J McDonald; S M Huff
Journal:  J Biomed Inform       Date:  2012-01-28       Impact factor: 6.317

4.  Analysis of error concentrations in SNOMED.

Authors:  Michael Halper; Yue Wang; Hua Min; Yan Chen; George Hripcsak; Yehoshua Perl; Kent A Spackman
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

Review 5.  A review of auditing methods applied to the content of controlled biomedical terminologies.

Authors:  Xinxin Zhu; Jung-Wei Fan; David M Baorto; Chunhua Weng; James J Cimino
Journal:  J Biomed Inform       Date:  2009-03-12       Impact factor: 6.317

6.  Auditing complex concepts in overlapping subsets of SNOMED.

Authors:  Yue Wang; Duo Wei; Junchuan Xu; Gai Elhanan; Yehoshua Perl; Michael Halper; Yan Chen; Kent A Spackman; George Hripcsak
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

7.  Complexity measures to track the evolution of a SNOMED hierarchy.

Authors:  Duo Wei; Yue Wang; Yehoshua Perl; Junchuan Xu; Michael Halper; Kent A Spackman; Kent Spackman
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

8.  OWL-NETS: Transforming OWL Representations for Improved Network Inference.

Authors:  Tiffany J Callahan; William A Baumgartner; Michael Bada; Adrianne L Stefanski; Ignacio Tripodi; Elizabeth K White; Lawrence E Hunter
Journal:  Pac Symp Biocomput       Date:  2018

9.  Quality assurance of chemical ingredient classification for the National Drug File - Reference Terminology.

Authors:  Ling Zheng; Hasan Yumak; Ling Chen; Christopher Ochs; James Geller; Joan Kapusnik-Uner; Yehoshua Perl
Journal:  J Biomed Inform       Date:  2017-07-16       Impact factor: 6.317

Review 10.  Introducing the Big Knowledge to Use (BK2U) challenge.

Authors:  Yehoshua Perl; James Geller; Michael Halper; Christopher Ochs; Ling Zheng; Joan Kapusnik-Uner
Journal:  Ann N Y Acad Sci       Date:  2016-10-17       Impact factor: 5.691

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