Literature DB >> 18689884

Loss of least-loaded class in asexual populations due to drift and epistasis.

Kavita Jain1.   

Abstract

We consider the dynamics of a nonrecombining haploid population of finite size that accumulates deleterious mutations irreversibly. This ratchet-like process occurs at a finite speed in the absence of epistasis, but it has been suggested that synergistic epistasis can halt the ratchet. Using a diffusion theory, we find explicit analytical expressions for the typical time between successive clicks of the ratchet for both nonepistatic and epistatic fitness functions. Our calculations show that the interclick time is of a scaling form that in the absence of epistasis gives a speed that is determined by size of the least-loaded class and the selection coefficient. With synergistic interactions, the ratchet speed is found to approach zero rapidly for arbitrary epistasis. Our analytical results are in good agreement with the numerical simulations.

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Year:  2008        PMID: 18689884      PMCID: PMC2516084          DOI: 10.1534/genetics.108.089136

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  25 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1978-11       Impact factor: 11.205

8.  The accumulation of deleterious genes in a population--Muller's Ratchet.

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9.  Understanding the evolutionary fate of finite populations: the dynamics of mutational effects.

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  14 in total

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Journal:  Genetics       Date:  2012-06-01       Impact factor: 4.562

2.  The Effects of Background and Interference Selection on Patterns of Genetic Variation in Subdivided Populations.

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Journal:  Genetics       Date:  2015-10-04       Impact factor: 4.562

3.  Rate of adaptation in sexuals and asexuals: a solvable model of the Fisher-Muller effect.

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4.  Muller's ratchet and the degeneration of the Drosophila miranda neo-Y chromosome.

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Journal:  Genetics       Date:  2010-03-09       Impact factor: 4.562

5.  Interference Effects of Deleterious and Beneficial Mutations in Large Asexual Populations.

Authors:  Kavita Jain
Journal:  Genetics       Date:  2019-01-30       Impact factor: 4.562

6.  Joint Prediction of the Effective Population Size and the Rate of Fixation of Deleterious Mutations.

Authors:  Enrique Santiago; Armando Caballero
Journal:  Genetics       Date:  2016-09-26       Impact factor: 4.562

7.  Fluctuations of fitness distributions and the rate of Muller's ratchet.

Authors:  Richard A Neher; Boris I Shraiman
Journal:  Genetics       Date:  2012-05-29       Impact factor: 4.562

8.  Genealogies of rapidly adapting populations.

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Review 9.  The effects of deleterious mutations on evolution at linked sites.

Authors:  Brian Charlesworth
Journal:  Genetics       Date:  2012-01       Impact factor: 4.562

10.  Do clones degenerate over time? Explaining the genetic variability of asexuals through population genetic models.

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