Literature DB >> 18680254

Evidence for protein radical-mediated nuclear tunneling in fatty acid alpha-oxygenase.

Ankur Gupta1, Arnab Mukherjee, Kenji Matsui, Justine P Roth.   

Abstract

Rice alpha-oxygenase (RalphaO) catalyzes the insertion of O2 into the Calpha-H bond of various fatty acids. The mechanism is thought to involve a tyrosyl radical as the oxidant on the basis of comparisons to the structurally homologous cyclooxygenase enzymes. Kinetic and spectroscopic results presented here for the wild-type RalphaO and the Tyr379Phe mutant indicate an irreversible H* abstraction mechanism and support the involvement of the proposed catalytic Tyr*. In addition, very large, weakly temperature dependent deuterium kinetic isotope effects (approximately 50) are observed, consistent with extensive nuclear tunneling. RalphaO, thus, presents a novel example where such quantum effects are associated with an amino acid radical-utilizing enzyme.

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Year:  2008        PMID: 18680254     DOI: 10.1021/ja8042273

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  14 in total

Review 1.  Enzymes of the cyclooxygenase pathways of prostanoid biosynthesis.

Authors:  William L Smith; Yoshihiro Urade; Per-Johan Jakobsson
Journal:  Chem Rev       Date:  2011-09-27       Impact factor: 60.622

2.  Tyrosine oxidation in heme oxygenase: examination of long-range proton-coupled electron transfer.

Authors:  Valeriy V Smirnov; Justine P Roth
Journal:  J Biol Inorg Chem       Date:  2014-07-15       Impact factor: 3.358

3.  Incorporation of fluorotyrosines into ribonucleotide reductase using an evolved, polyspecific aminoacyl-tRNA synthetase.

Authors:  Ellen C Minnihan; Douglas D Young; Peter G Schultz; JoAnne Stubbe
Journal:  J Am Chem Soc       Date:  2011-09-21       Impact factor: 15.419

4.  Hydrogen Donation but not Abstraction by a Tyrosine (Y68) during Endoperoxide Installation by Verruculogen Synthase (FtmOx1).

Authors:  Noah P Dunham; José M Del Río Pantoja; Bo Zhang; Lauren J Rajakovich; Benjamin D Allen; Carsten Krebs; Amie K Boal; J Martin Bollinger
Journal:  J Am Chem Soc       Date:  2019-06-12       Impact factor: 15.419

5.  An integrated model for enzyme catalysis emerges from studies of hydrogen tunneling.

Authors:  Judith P Klinman
Journal:  Chem Phys Lett       Date:  2009-03-26       Impact factor: 2.328

6.  Investigating inner-sphere reorganization via secondary kinetic isotope effects in the C-H cleavage reaction catalyzed by soybean lipoxygenase: tunneling in the substrate backbone as well as the transferred hydrogen.

Authors:  Matthew P Meyer; Judith P Klinman
Journal:  J Am Chem Soc       Date:  2010-12-30       Impact factor: 15.419

Review 7.  Hydrogen tunneling links protein dynamics to enzyme catalysis.

Authors:  Judith P Klinman; Amnon Kohen
Journal:  Annu Rev Biochem       Date:  2013       Impact factor: 23.643

Review 8.  Importance of protein dynamics during enzymatic C-H bond cleavage catalysis.

Authors:  Judith P Klinman
Journal:  Biochemistry       Date:  2013-02-12       Impact factor: 3.162

9.  Aqueous phase C-H bond oxidation reaction of arylalkanes catalyzed by a water-soluble cationic Ru(III) complex [(pymox-Me2)2RuCl2]+BF4-.

Authors:  Chae S Yi; Ki-Hyeok Kwon; Do W Lee
Journal:  Org Lett       Date:  2009-04-02       Impact factor: 6.005

Review 10.  Prostaglandin H synthase: resolved and unresolved mechanistic issues.

Authors:  Ah-Lim Tsai; Richard J Kulmacz
Journal:  Arch Biochem Biophys       Date:  2009-09-01       Impact factor: 4.013

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