Literature DB >> 18679430

Jamming the ratchet of transcription.

Vladimir Svetlov, Evgeny Nudler.   

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Year:  2008        PMID： 18679430      PMCID： PMC2929366          DOI： 10.1038/nsmb0808-777

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN： 1545-9985            Impact factor:   15.369


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  12 in total

1.  Structural basis of transcription: alpha-amanitin-RNA polymerase II cocrystal at 2.8 A resolution.

Authors:  David A Bushnell; Patrick Cramer; Roger D Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

2.  Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution.

Authors:  Dmitry G Vassylyev; Shun-ichi Sekine; Oleg Laptenko; Jookyung Lee; Marina N Vassylyeva; Sergei Borukhov; Shigeyuki Yokoyama
Journal:  Nature       Date:  2002-05-08       Impact factor: 49.962

3.  A ratchet mechanism of transcription elongation and its control.

Authors:  Gil Bar-Nahum; Vitaly Epshtein; Andrei E Ruckenstein; Ruslan Rafikov; Arkady Mustaev; Evgeny Nudler
Journal:  Cell       Date:  2005-01-28       Impact factor: 41.582

4.  Mechanochemical kinetics of transcription elongation.

Authors:  Lu Bai; Robert M Fulbright; Michelle D Wang
Journal:  Phys Rev Lett       Date:  2007-02-08       Impact factor: 9.161

5.  A central role of the RNA polymerase trigger loop in active-site rearrangement during transcriptional pausing.

Authors:  Innokenti Toulokhonov; Jinwei Zhang; Murali Palangat; Robert Landick
Journal:  Mol Cell       Date:  2007-08-03       Impact factor: 17.970

6.  Structural basis for substrate loading in bacterial RNA polymerase.

Authors:  Dmitry G Vassylyev; Marina N Vassylyeva; Jinwei Zhang; Murali Palangat; Irina Artsimovitch; Robert Landick
Journal:  Nature       Date:  2007-06-20       Impact factor: 49.962

Review 7.  RNA polymerase: the vehicle of transcription.

Authors:  Sergei Borukhov; Evgeny Nudler
Journal:  Trends Microbiol       Date:  2008-02-14       Impact factor: 17.079

8.  Structural basis of transcription inhibition by alpha-amanitin and implications for RNA polymerase II translocation.

Authors:  Florian Brueckner; Patrick Cramer
Journal:  Nat Struct Mol Biol       Date:  2008-06-13       Impact factor: 15.369

9.  Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis.

Authors:  Dong Wang; David A Bushnell; Kenneth D Westover; Craig D Kaplan; Roger D Kornberg
Journal:  Cell       Date:  2006-12-01       Impact factor: 41.582

10.  Structural, functional, and genetic analysis of sorangicin inhibition of bacterial RNA polymerase.

Authors:  Elizabeth A Campbell; Olga Pavlova; Nikolay Zenkin; Fred Leon; Herbert Irschik; Rolf Jansen; Konstantin Severinov; Seth A Darst
Journal:  EMBO J       Date:  2005-02-03       Impact factor: 11.598
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  5 in total

1.  Torpedo nuclease Rat1 is insufficient to terminate RNA polymerase II in vitro.

Authors:  Stefan Dengl; Patrick Cramer
Journal:  J Biol Chem       Date:  2009-06-17       Impact factor: 5.157

Review 2.  Basic mechanism of transcription by RNA polymerase II.

Authors:  Vladimir Svetlov; Evgeny Nudler
Journal:  Biochim Biophys Acta       Date:  2012-09-06

Review 3.  RNA polymerase active center: the molecular engine of transcription.

Authors:  Evgeny Nudler
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

4.  A bridge to transcription by RNA polymerase.

Authors:  Craig D Kaplan; Roger D Kornberg
Journal:  J Biol       Date:  2008-12-02

5.  Structure-function studies of the RNA polymerase II elongation complex.

Authors:  Florian Brueckner; Karim Jean Armache; Alan Cheung; Gerke E Damsma; Hubert Kettenberger; Elisabeth Lehmann; Jasmin Sydow; Patrick Cramer
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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