Literature DB >> 18612647

Ivory identification by DNA profiling of cytochrome b gene.

James Chun-I Lee1, Hsing-Mei Hsieh, Li-Hung Huang, Yi-Chen Kuo, Jane-Hong Wu, Shih-Chien Chin, An-Hsing Lee, Adrian Linacre, Li-Chin Tsai.   

Abstract

Ivory can be visually identified in its native form as coming from an elephant species; however, determining from which of the three extant elephant species a section of ivory originates is more problematic. We report on a method that will identify and distinguish the protected and endangered elephant species, Elephas maximus or Loxodonta sp. To identify the species of elephant from ivory products, we developed three groups of nested PCR amplifications within the cytochrome b gene that generate amplification products using highly degraded DNA isolated from confiscated ivory samples dating from 1995. DNA from a total of 382 out of 453 ivory samples were successfully isolated and amplified leading to species identification. All sequences were searched against GenBank and found to match with E. maximus and Loxodonta sp. with at least 99% similarity. The samples that were tested came from eight Asian elephants, 14 African forest elephants (Loxodonta cyclotis), and 360 African savannah elephants (Loxodonta africana). This study demonstrates a high success rate in species identification of ivory by a nested PCR approach within the cytochrome b gene which provides the necessary information for the protection of endangered species conservation.

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Year:  2008        PMID: 18612647     DOI: 10.1007/s00414-008-0264-0

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  24 in total

1.  Non-destructive analysis of the two subspecies of African elephants, mammoth, hippopotamus, and sperm whale ivories by visible and short-wave near infrared spectroscopy and chemometrics.

Authors:  Masahiko Shimoyama; Susumu Morimoto; Yukihiro Ozaki
Journal:  Analyst       Date:  2004-04-20       Impact factor: 4.616

2.  Using morphometric and analytical techniques to characterize elephant ivory.

Authors:  Rina Rani Singh; Surendra Prakash Goyal; Param Pal Khanna; Pulok Kumar Mukherjee; Raman Sukumar
Journal:  Forensic Sci Int       Date:  2006-08-04       Impact factor: 2.395

3.  Molecular characterization of the canine mitochondrial DNA control region for forensic applications.

Authors:  Cordula Eichmann; Walther Parson
Journal:  Int J Legal Med       Date:  2007-01-12       Impact factor: 2.686

4.  DNA profiling of shahtoosh.

Authors:  James Chun-I Lee; Li-Chin Tsai; Chung-Yu Yang; Chia-Ling Liu; Li-Hung Huang; Adrian Linacre; Hsing-Mei Hsieh
Journal:  Electrophoresis       Date:  2006-09       Impact factor: 3.535

5.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

6.  Species identification of Kachuga tecta using the cytochrome b gene.

Authors:  Hsing-Mei Hsieh; Li-Hung Huang; Li-Chin Tsai; Chia-Ling Liu; Yi-Chen Kuo; Chung-Ting Hsiao; Adrian Linacre; James Chun-I Lee
Journal:  J Forensic Sci       Date:  2006-01       Impact factor: 1.832

7.  Two universal primer sets for species identification among vertebrates.

Authors:  Takashi Kitano; Kazuo Umetsu; Wei Tian; Motoki Osawa
Journal:  Int J Legal Med       Date:  2006-07-15       Impact factor: 2.686

8.  Purification of nuclear DNA from single hair shafts for DNA analysis in forensic sciences.

Authors:  H Nozawa; T Yamamoto; R Uchihi; T Yoshimoto; K Tamaki; S Hayashi; T Ozawa; Y Katsumata
Journal:  Leg Med (Tokyo)       Date:  1999-04       Impact factor: 1.376

9.  Using DNA to track the origin of the largest ivory seizure since the 1989 trade ban.

Authors:  Samuel K Wasser; Celia Mailand; Rebecca Booth; Benezeth Mutayoba; Emily Kisamo; Bill Clark; Matthew Stephens
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-26       Impact factor: 11.205

10.  DNA analysis indicates that Asian elephants are native to Borneo and are therefore a high priority for conservation.

Authors:  Prithiviraj Fernando; T N C Vidya; John Payne; Michael Stuewe; Geoffrey Davison; Raymond J Alfred; P Andau; Edwin Bosi; Annelisa Kilbourn; Don J Melnick
Journal:  PLoS Biol       Date:  2003-08-18       Impact factor: 8.029

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  13 in total

1.  The use of DNA identification in prosecuting wildlife-traffickers in Australia: do the penalties fit the crimes?

Authors:  Rebecca N Johnson
Journal:  Forensic Sci Med Pathol       Date:  2010-07-17       Impact factor: 2.007

Review 2.  DNA typing in wildlife crime: recent developments in species identification.

Authors:  Shanan S Tobe; Adrian Linacre
Journal:  Forensic Sci Med Pathol       Date:  2010-06-05       Impact factor: 2.007

3.  Forensic species identification based on size variation of mitochondrial DNA hypervariable regions.

Authors:  Hiroaki Nakamura; Tomonori Muro; Shinji Imamura; Isao Yuasa
Journal:  Int J Legal Med       Date:  2008-12-04       Impact factor: 2.686

4.  Forensic animal DNA analysis using economical two-step direct PCR.

Authors:  Thitika Kitpipit; Wilaiwan Chotigeat; Adrian Linacre; Phuvadol Thanakiatkrai
Journal:  Forensic Sci Med Pathol       Date:  2014-01-17       Impact factor: 2.007

5.  Discrimination of highly degraded, aged Asian and African elephant ivory using denaturing gradient gel electrophoresis (DGGE).

Authors:  Nitchakamon Suwanchatree; Phuvadol Thanakiatkrai; Adrian Linacre; Thitika Kitpipit
Journal:  Int J Legal Med       Date:  2020-09-25       Impact factor: 2.686

6.  An overview to the investigative approach to species testing in wildlife forensic science.

Authors:  Adrian Linacre; Shanan S Tobe
Journal:  Investig Genet       Date:  2011-01-13

7.  Two caseworks for one gene: successful species identification from compromised bone materials with the 12S rRNA.

Authors:  Gianmarco Ferri; Beatrice Corradini; Denise Gianfreda; Francesca Ferrari; Enrico Silingardi
Journal:  Int J Legal Med       Date:  2022-03-25       Impact factor: 2.791

Review 8.  Forensic genetics and genomics: Much more than just a human affair.

Authors:  Miguel Arenas; Filipe Pereira; Manuela Oliveira; Nadia Pinto; Alexandra M Lopes; Veronica Gomes; Angel Carracedo; Antonio Amorim
Journal:  PLoS Genet       Date:  2017-09-21       Impact factor: 5.917

9.  Pet fur or fake fur? A forensic approach.

Authors:  Elena Pilli; Rosario Casamassima; Stefania Vai; Antonino Virgili; Filippo Barni; Giancarlo D'Errico; Andrea Berti; Giampietro Lago; David Caramelli
Journal:  Investig Genet       Date:  2014-06-02

10.  Use of handheld X-ray fluorescence as a non-invasive method to distinguish between Asian and African elephant tusks.

Authors:  Kittisak Buddhachat; Chatchote Thitaram; Janine L Brown; Sarisa Klinhom; Pakkanut Bansiddhi; Kitichaya Penchart; Kanita Ouitavon; Khanittha Sriaksorn; Chalermpol Pa-in; Budsabong Kanchanasaka; Chaleamchat Somgird; Korakot Nganvongpanit
Journal:  Sci Rep       Date:  2016-04-21       Impact factor: 4.379

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