Literature DB >> 20526699

DNA typing in wildlife crime: recent developments in species identification.

Shanan S Tobe1, Adrian Linacre.   

Abstract

Species identification has become a tool in the investigation of acts of alleged wildlife crimes. This review details the steps required in DNA testing in wildlife crime investigations and highlights recent developments where not only can individual species be identified within a mixture of species but multiple species can be identified simultaneously. 'What species is this?' is a question asked frequently in wildlife crime investigations. Depending on the material being examined, DNA analysis may offer the best opportunity to answer this question. Species testing requires the comparison of the DNA type from the unknown sample to DNA types on a database. The areas of DNA tested are on the mitochondria and include predominantly the cytochrome b gene and the cytochrome oxidase I gene. Standard analysis requires the sequencing of part of one of these genes and comparing the sequence to that held on a repository of DNA sequences such as the GenBank database. Much of the DNA sequence of either of these two genes is conserved with only parts being variable. A recent development is to target areas of those sequences that are specific to a species; this can increase the sensitivity of the test with no loss of specificity. The benefit of targeting species specific sequences is that within a mixture of two of more species, the individual species within the mixture can be identified. This identification would not be possible using standard sequencing. These new developments can lead to a greater number of samples being tested in alleged wildlife crimes.

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Year:  2010        PMID: 20526699     DOI: 10.1007/s12024-010-9168-7

Source DB:  PubMed          Journal:  Forensic Sci Med Pathol        ISSN: 1547-769X            Impact factor:   2.007


  91 in total

1.  Phylogenetic study of complete cytochrome b genes in musk deer (genus Moschus) using museum samples.

Authors:  B Su; Y X Wang; H Lan; W Wang; Y Zhang
Journal:  Mol Phylogenet Evol       Date:  1999-08       Impact factor: 4.286

2.  A simple method for domestic animal identification in Argentina using PCR-RFLP analysis of cytochrome b gene.

Authors:  Claudio M Bravi; Juan P Lirón; Patricia M Mirol; María V Ripoli; Pilar Peral-García; Guillermo Giovambattista
Journal:  Leg Med (Tokyo)       Date:  2004-10       Impact factor: 1.376

3.  Identification of meats from red deer (Cervus elaphus), fallow deer (Dama dama), and roe deer (Capreolus capreolus) using polymerase chain reaction targeting specific sequences from the mitochondrial 12S rRNA gene.

Authors:  V Fajardo; I González; I López-Calleja; I Martín; M Rojas; P E Hernández; T García; Rosario Martín
Journal:  Meat Sci       Date:  2007-01-03       Impact factor: 5.209

4.  Tri-allelic SNP markers enable analysis of mixed and degraded DNA samples.

Authors:  Antoinette A Westen; Anuska S Matai; Jeroen F J Laros; Hugo C Meiland; Mandy Jasper; Wiljo J F de Leeuw; Peter de Knijff; Titia Sijen
Journal:  Forensic Sci Int Genet       Date:  2009-03-09       Impact factor: 4.882

5.  Validation of a single nucleotide polymorphism (SNP) typing assay with 49 SNPs for forensic genetic testing in a laboratory accredited according to the ISO 17025 standard.

Authors:  Claus Børsting; Eszter Rockenbauer; Niels Morling
Journal:  Forensic Sci Int Genet       Date:  2009-05-07       Impact factor: 4.882

6.  Nuclear integrations: challenges for mitochondrial DNA markers.

Authors:  D X Zhang; G M Hewitt
Journal:  Trends Ecol Evol       Date:  1996-06       Impact factor: 17.712

7.  Molecular insight into a wildlife crime: the case of a peafowl slaughter.

Authors:  Sandeep Kumar Gupta; Sunil Kumar Verma; Lalji Singh
Journal:  Forensic Sci Int       Date:  2005-01-26       Impact factor: 2.395

8.  Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers.

Authors:  T D Kocher; W K Thomas; A Meyer; S V Edwards; S Pääbo; F X Villablanca; A C Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

9.  DNA profiling of shahtoosh.

Authors:  James Chun-I Lee; Li-Chin Tsai; Chung-Yu Yang; Chia-Ling Liu; Li-Hung Huang; Adrian Linacre; Hsing-Mei Hsieh
Journal:  Electrophoresis       Date:  2006-09       Impact factor: 3.535

10.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

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  8 in total

1.  Combating wildlife crime.

Authors:  Linzi Wilson-Wilde
Journal:  Forensic Sci Med Pathol       Date:  2010-09       Impact factor: 2.007

2.  Bite through the tent.

Authors:  Jana Naue; Sabine Lutz-Bonengel; Klaus Pietsch; Timo Sänger; Nicola Schlauderer; Ulrike Schmidt
Journal:  Int J Legal Med       Date:  2012-02-24       Impact factor: 2.686

3.  An overview to the investigative approach to species testing in wildlife forensic science.

Authors:  Adrian Linacre; Shanan S Tobe
Journal:  Investig Genet       Date:  2011-01-13

4.  A universal method for species identification of mammals utilizing next generation sequencing for the analysis of DNA mixtures.

Authors:  Andreas O Tillmar; Barbara Dell'Amico; Jenny Welander; Gunilla Holmlund
Journal:  PLoS One       Date:  2013-12-16       Impact factor: 3.240

5.  Automated Forensic Animal Family Identification by Nested PCR and Melt Curve Analysis on an Off-the-Shelf Thermocycler Augmented with a Centrifugal Microfluidic Disk Segment.

Authors:  Mark Keller; Jana Naue; Roland Zengerle; Felix von Stetten; Ulrike Schmidt
Journal:  PLoS One       Date:  2015-07-06       Impact factor: 3.240

6.  Molecular tools for identification of shark species involved in depredation incidents in Western Australian fisheries.

Authors:  Seema Fotedar; Sherralee Lukehurst; Gary Jackson; Michael Snow
Journal:  PLoS One       Date:  2019-01-11       Impact factor: 3.240

7.  Molecular Sexing and Species Detection of Antlered European Hunting Game for Forensic Purposes.

Authors:  Petra Zenke; Orsolya Krisztina Zorkóczy; Pál Lehotzky; László Ózsvári; Zsolt Pádár
Journal:  Animals (Basel)       Date:  2022-01-20       Impact factor: 2.752

8.  Where is the game? Wild meat products authentication in South Africa: a case study.

Authors:  Maria Eugenia D'Amato; Evguenia Alechine; Kevin Wesley Cloete; Sean Davison; Daniel Corach
Journal:  Investig Genet       Date:  2013-03-01
  8 in total

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