Literature DB >> 35333964

Two caseworks for one gene: successful species identification from compromised bone materials with the 12S rRNA.

Gianmarco Ferri1, Beatrice Corradini2, Denise Gianfreda1, Francesca Ferrari1, Enrico Silingardi1.   

Abstract

The availability of a reliable molecular assay in species recognition in forensic cases is of paramount importance when visual inspection or morphological methods are not exhaustive, especially from challenging samples. Here, two different caseworks involving bone samples founded during medico-legal outdoor investigations are presented. In order to exclude the human nature of the specimens and to determine the exact species they belong to, we proceeded with the molecular approach trying to generate sequences from the classical mtDNA markers cyt b and COI. However, they both gave critical results. For this reason, a short amplicon of ~ 150 bp of the 12S rRNA gene was used as an alternative.This short fragment was sufficient to identify the biological origin of the bone specimens with a high degree of certainty leading to the exclusion of their human nature. This work highlights the utility of the 12S rRNA and underlines the importance of deepen the choice of alternative shorter markers with respect to the classical ones, in order to achieve species identification even from challenging and degraded material in forensic criminal and wildlife caseworks.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  12S rRNA; DNA barcoding; Degraded DNA; Mitochondrial DNA; Skeletal remains; Species identification

Mesh:

Substances:

Year:  2022        PMID: 35333964     DOI: 10.1007/s00414-022-02817-x

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.791


  21 in total

1.  Species identification by means of the cytochrome b gene.

Authors:  W Parson; K Pegoraro; H Niederstätter; M Föger; M Steinlechner
Journal:  Int J Legal Med       Date:  2000       Impact factor: 2.686

2.  Biological identifications through DNA barcodes.

Authors:  Paul D N Hebert; Alina Cywinska; Shelley L Ball; Jeremy R deWaard
Journal:  Proc Biol Sci       Date:  2003-02-07       Impact factor: 5.349

3.  Twelve-year experience in identification of skeletal remains from mass graves.

Authors:  Simun Andelinović; Davorka Sutlović; Ivana Erceg Ivkosić; Vedrana Skaro; Ante Ivkosić; Frane Paić; Boja Rezić; Marija Definis-Gojanović; Dragan Primorac
Journal:  Croat Med J       Date:  2005-08       Impact factor: 1.351

4.  Forensic genetic investigation of human skeletal remains recovered from the La Belle shipwreck.

Authors:  Angie Ambers; Magdalena M Bus; Jonathan L King; Bradford Jones; Jeffrey Durst; James E Bruseth; Harrell Gill-King; Bruce Budowle
Journal:  Forensic Sci Int       Date:  2019-11-12       Impact factor: 2.395

5.  Determining the human origin of fragments of burnt bone: a comparative study of histological, immunological and DNA techniques.

Authors:  C Cattaneo; S DiMartino; S Scali; O E Craig; M Grandi; R J Sokol
Journal:  Forensic Sci Int       Date:  1999-06-28       Impact factor: 2.395

6.  Cytochrome b gene for species identification of the conservation animals.

Authors:  H M Hsieh; H L Chiang; L C Tsai; S Y Lai; N E Huang; A Linacre; J C Lee
Journal:  Forensic Sci Int       Date:  2001-10-15       Impact factor: 2.395

Review 7.  Differentiating human bone from animal bone: a review of histological methods.

Authors:  Maria L Hillier; Lynne S Bell
Journal:  J Forensic Sci       Date:  2007-03       Impact factor: 1.832

8.  Human and non-human bone identification using FTIR spectroscopy.

Authors:  Qi Wang; Wei Li; Ruina Liu; Kai Zhang; Haohui Zhang; Shuanliang Fan; Zhenyuan Wang
Journal:  Int J Legal Med       Date:  2018-03-16       Impact factor: 2.686

9.  Differentiating human versus non-human bone by exploring the nutrient foramen: implications for forensic anthropology.

Authors:  Vail Johnson; Sophie Beckett; Nicholas Márquez-Grant
Journal:  Int J Legal Med       Date:  2017-08-21       Impact factor: 2.686

Review 10.  Fragment analysis in forensic anthropology.

Authors:  Douglas H Ubelaker; Yaohan Wu
Journal:  Forensic Sci Res       Date:  2020-12-28
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