Literature DB >> 18593708

Should I stay or should I go? Eukaryotic translation initiation factors 1 and 1A control start codon recognition.

Sarah F Mitchell1, Jon R Lorsch.   

Abstract

Start codon selection is a key step in translation initiation as it sets the reading frame for decoding. Two eukaryotic initiation factors, eIF1 and eIF1A, are key actors in this process. Recent work has elucidated many details of the mechanisms these factors use to control start site selection. eIF1 prevents the irreversible GTP hydrolysis that commits the ribosome to initiation at a particular codon. eIF1A both promotes and inhibits commitment through the competing influences of its two unstructured termini. Both factors perform their tasks through a variety of interactions with other components of the initiation machinery, in many cases mediated by the unstructured regions of the two proteins.

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Year:  2008        PMID: 18593708      PMCID: PMC2562056          DOI: 10.1074/jbc.R800031200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  44 in total

1.  Communication between eukaryotic translation initiation factors 5 and 1A within the ribosomal pre-initiation complex plays a role in start site selection.

Authors:  David Maag; Mikkel A Algire; Jon R Lorsch
Journal:  J Mol Biol       Date:  2005-12-15       Impact factor: 5.469

Review 2.  Where to begin? The mechanism of translation initiation codon selection in eukaryotes.

Authors:  Mikkel A Algire; Jon R Lorsch
Journal:  Curr Opin Chem Biol       Date:  2006-08-28       Impact factor: 8.822

3.  Eukaryotic initiation factor (eIF) 1 carries two distinct eIF5-binding faces important for multifactor assembly and AUG selection.

Authors:  Mikhail Reibarkh; Yasufumi Yamamoto; Chingakham Ranjit Singh; Federico del Rio; Amr Fahmy; Bumjun Lee; Rafael E Luna; Miki Ii; Gerhard Wagner; Katsura Asano
Journal:  J Biol Chem       Date:  2007-11-01       Impact factor: 5.157

4.  eIF3j is located in the decoding center of the human 40S ribosomal subunit.

Authors:  Christopher S Fraser; Katherine E Berry; John W B Hershey; Jennifer A Doudna
Journal:  Mol Cell       Date:  2007-06-22       Impact factor: 17.970

5.  Dissociation of eIF1 from the 40S ribosomal subunit is a key step in start codon selection in vivo.

Authors:  Yuen-Nei Cheung; David Maag; Sarah F Mitchell; Christie A Fekete; Mikkel A Algire; Julie E Takacs; Nikolay Shirokikh; Tatyana Pestova; Jon R Lorsch; Alan G Hinnebusch
Journal:  Genes Dev       Date:  2007-05-15       Impact factor: 11.361

6.  Eukaryotic translation initiation factor 3 (eIF3) and eIF2 can promote mRNA binding to 40S subunits independently of eIF4G in yeast.

Authors:  Antonina V Jivotovskaya; Leos Valásek; Alan G Hinnebusch; Klaus H Nielsen
Journal:  Mol Cell Biol       Date:  2006-02       Impact factor: 4.272

7.  N- and C-terminal residues of eIF1A have opposing effects on the fidelity of start codon selection.

Authors:  Christie A Fekete; Sarah F Mitchell; Vera A Cherkasova; Drew Applefield; Mikkel A Algire; David Maag; Adesh K Saini; Jon R Lorsch; Alan G Hinnebusch
Journal:  EMBO J       Date:  2007-03-01       Impact factor: 11.598

8.  The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome.

Authors:  Lori A Passmore; T Martin Schmeing; David Maag; Drew J Applefield; Michael G Acker; Mikkel A Algire; Jon R Lorsch; V Ramakrishnan
Journal:  Mol Cell       Date:  2007-04-13       Impact factor: 17.970

9.  Reconfiguration of yeast 40S ribosomal subunit domains by the translation initiation multifactor complex.

Authors:  Robert J C Gilbert; Yulya Gordiyenko; Tobias von der Haar; Andreas F-P Sonnen; Gregor Hofmann; Maria Nardelli; David I Stuart; John E G McCarthy
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-26       Impact factor: 11.205

10.  Structure of the eukaryotic initiation factor (eIF) 5 reveals a fold common to several translation factors.

Authors:  Maria R Conte; Geoff Kelly; Jeff Babon; Domenico Sanfelice; James Youell; Stephen J Smerdon; Christopher G Proud
Journal:  Biochemistry       Date:  2006-04-11       Impact factor: 3.162

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  25 in total

1.  Initiation context modulates autoregulation of eukaryotic translation initiation factor 1 (eIF1).

Authors:  Ivaylo P Ivanov; Gary Loughran; Matthew S Sachs; John F Atkins
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

Review 2.  Molecular view of 43 S complex formation and start site selection in eukaryotic translation initiation.

Authors:  Jon R Lorsch; Thomas E Dever
Journal:  J Biol Chem       Date:  2010-05-05       Impact factor: 5.157

3.  GTP-independent tRNA delivery to the ribosomal P-site by a novel eukaryotic translation factor.

Authors:  Sergey E Dmitriev; Ilya M Terenin; Dmitri E Andreev; Pavel A Ivanov; Jacov E Dunaevsky; William C Merrick; Ivan N Shatsky
Journal:  J Biol Chem       Date:  2010-06-21       Impact factor: 5.157

4.  Kinetic and thermodynamic analysis of the role of start codon/anticodon base pairing during eukaryotic translation initiation.

Authors:  Sarah E Kolitz; Julie E Takacs; Jon R Lorsch
Journal:  RNA       Date:  2008-11-24       Impact factor: 4.942

5.  The RNA recognition motif of eukaryotic translation initiation factor 3g (eIF3g) is required for resumption of scanning of posttermination ribosomes for reinitiation on GCN4 and together with eIF3i stimulates linear scanning.

Authors:  Lucie Cuchalová; Tomás Kouba; Anna Herrmannová; István Dányi; Wen-Ling Chiu; Leos Valásek
Journal:  Mol Cell Biol       Date:  2010-08-02       Impact factor: 4.272

6.  Gle1 is a multifunctional DEAD-box protein regulator that modulates Ded1 in translation initiation.

Authors:  Timothy A Bolger; Susan R Wente
Journal:  J Biol Chem       Date:  2011-09-23       Impact factor: 5.157

7.  Cancer-Associated Eukaryotic Translation Initiation Factor 1A Mutants Impair Rps3 and Rps10 Binding and Enhance Scanning of Cell Cycle Genes.

Authors:  Urmila Sehrawat; Femke Koning; Shaked Ashkenazi; Gil Stelzer; Dena Leshkowitz; Rivka Dikstein
Journal:  Mol Cell Biol       Date:  2019-01-16       Impact factor: 4.272

8.  Facilitated leaky scanning and atypical ribosome shunting direct downstream translation initiation on the tricistronic S1 mRNA of avian reovirus.

Authors:  Trina Racine; Roy Duncan
Journal:  Nucleic Acids Res       Date:  2010-07-07       Impact factor: 16.971

Review 9.  IRES-induced conformational changes in the ribosome and the mechanism of translation initiation by internal ribosomal entry.

Authors:  Christopher U T Hellen
Journal:  Biochim Biophys Acta       Date:  2009-06-17

10.  The indispensable N-terminal half of eIF3j/HCR1 cooperates with its structurally conserved binding partner eIF3b/PRT1-RRM and with eIF1A in stringent AUG selection.

Authors:  Latifa Elantak; Susan Wagner; Anna Herrmannová; Martina Karásková; Edit Rutkai; Peter J Lukavsky; Leos Valásek
Journal:  J Mol Biol       Date:  2010-01-11       Impact factor: 5.469

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