Literature DB >> 18571451

Piwi and piRNAs act upstream of an endogenous siRNA pathway to suppress Tc3 transposon mobility in the Caenorhabditis elegans germline.

Partha P Das1, Marloes P Bagijn, Leonard D Goldstein, Julie R Woolford, Nicolas J Lehrbach, Alexandra Sapetschnig, Heeran R Buhecha, Michael J Gilchrist, Kevin L Howe, Rory Stark, Nik Matthews, Eugene Berezikov, René F Ketting, Simon Tavaré, Eric A Miska.   

Abstract

The Piwi proteins of the Argonaute superfamily are required for normal germline development in Drosophila, zebrafish, and mice and associate with 24-30 nucleotide RNAs termed piRNAs. We identify a class of 21 nucleotide RNAs, previously named 21U-RNAs, as the piRNAs of C. elegans. Piwi and piRNA expression is restricted to the male and female germline and independent of many proteins in other small-RNA pathways, including DCR-1. We show that Piwi is specifically required to silence Tc3, but not other Tc/mariner DNA transposons. Tc3 excision rates in the germline are increased at least 100-fold in piwi mutants as compared to wild-type. We find no evidence for a Ping-Pong model for piRNA amplification in C. elegans. Instead, we demonstrate that Piwi acts upstream of an endogenous siRNA pathway in Tc3 silencing. These data might suggest a link between piRNA and siRNA function.

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Year:  2008        PMID: 18571451      PMCID: PMC3353317          DOI: 10.1016/j.molcel.2008.06.003

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  73 in total

1.  A novel class of small RNAs bind to MILI protein in mouse testes.

Authors:  Alexei Aravin; Dimos Gaidatzis; Sébastien Pfeffer; Mariana Lagos-Quintana; Pablo Landgraf; Nicola Iovino; Patricia Morris; Michael J Brownstein; Satomi Kuramochi-Miyagawa; Toru Nakano; Minchen Chien; James J Russo; Jingyue Ju; Robert Sheridan; Chris Sander; Mihaela Zavolan; Thomas Tuschl
Journal:  Nature       Date:  2006-06-04       Impact factor: 49.962

2.  A germline-specific class of small RNAs binds mammalian Piwi proteins.

Authors:  Angélique Girard; Ravi Sachidanandam; Gregory J Hannon; Michelle A Carmell
Journal:  Nature       Date:  2006-06-04       Impact factor: 49.962

3.  SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells.

Authors:  Peter W Reddien; Néstor J Oviedo; Joya R Jennings; James C Jenkin; Alejandro Sánchez Alvarado
Journal:  Science       Date:  2005-11-25       Impact factor: 47.728

4.  A novel class of small RNAs in mouse spermatogenic cells.

Authors:  Shane T Grivna; Ergin Beyret; Zhong Wang; Haifan Lin
Journal:  Genes Dev       Date:  2006-06-09       Impact factor: 11.361

5.  Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes.

Authors:  Toshiaki Watanabe; Atsushi Takeda; Tomoyuki Tsukiyama; Kazuyuki Mise; Tetsuro Okuno; Hiroyuki Sasaki; Naojiro Minami; Hiroshi Imai
Journal:  Genes Dev       Date:  2006-06-09       Impact factor: 11.361

6.  Telomere elongation is under the control of the RNAi-based mechanism in the Drosophila germline.

Authors:  Mikhail Savitsky; Dmitry Kwon; Pavel Georgiev; Alla Kalmykova; Vladimir Gvozdev
Journal:  Genes Dev       Date:  2006-02-01       Impact factor: 11.361

7.  Characterization of the piRNA complex from rat testes.

Authors:  Nelson C Lau; Anita G Seto; Jinkuk Kim; Satomi Kuramochi-Miyagawa; Toru Nakano; David P Bartel; Robert E Kingston
Journal:  Science       Date:  2006-06-15       Impact factor: 47.728

8.  Characterization of a germ-line proliferation mutation in C. elegans.

Authors:  M J Beanan; S Strome
Journal:  Development       Date:  1992-11       Impact factor: 6.868

9.  Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis.

Authors:  Junjie Li; Zhiyong Yang; Bin Yu; Jun Liu; Xuemei Chen
Journal:  Curr Biol       Date:  2005-08-23       Impact factor: 10.834

10.  Mobilization of quiet, endogenous Tc3 transposons of Caenorhabditis elegans by forced expression of Tc3 transposase.

Authors:  H G van Luenen; S D Colloms; R H Plasterk
Journal:  EMBO J       Date:  1993-06       Impact factor: 11.598

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  206 in total

1.  Identification and characterization of piRNA-like small RNAs in the gonad of sea urchin (Strongylocentrotus nudus).

Authors:  Zhenlin Wei; Xiaolin Liu; Huilin Zhang
Journal:  Mar Biotechnol (NY)       Date:  2011-12-13       Impact factor: 3.619

2.  Stress resets ancestral heritable small RNA responses.

Authors:  Leah Houri-Zeevi; Guy Teichman; Hila Gingold; Oded Rechavi
Journal:  Elife       Date:  2021-03-17       Impact factor: 8.140

3.  piRNAs and piRNA-Dependent siRNAs Protect Conserved and Essential C. elegans Genes from Misrouting into the RNAi Pathway.

Authors:  Carolyn M Phillips; Kristen C Brown; Brooke E Montgomery; Gary Ruvkun; Taiowa A Montgomery
Journal:  Dev Cell       Date:  2015-08-13       Impact factor: 12.270

Review 4.  On the road to reading the RNA-interference code.

Authors:  Haruhiko Siomi; Mikiko C Siomi
Journal:  Nature       Date:  2009-01-22       Impact factor: 49.962

5.  Two Piwi proteins, Xiwi and Xili, are expressed in the Xenopus female germline.

Authors:  Anna Wilczynska; Nicola Minshall; Javier Armisen; Eric A Miska; Nancy Standart
Journal:  RNA       Date:  2009-02       Impact factor: 4.942

Review 6.  Recognizing the enemy within: licensing RNA-guided genome defense.

Authors:  Phillip A Dumesic; Hiten D Madhani
Journal:  Trends Biochem Sci       Date:  2013-11-23       Impact factor: 13.807

Review 7.  Small RNAs as guardians of the genome.

Authors:  Colin D Malone; Gregory J Hannon
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

8.  A Neuronal piRNA Pathway Inhibits Axon Regeneration in C. elegans.

Authors:  Kyung Won Kim; Ngang Heok Tang; Matthew G Andrusiak; Zilu Wu; Andrew D Chisholm; Yishi Jin
Journal:  Neuron       Date:  2018-01-27       Impact factor: 17.173

Review 9.  RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond.

Authors:  Stephane E Castel; Robert A Martienssen
Journal:  Nat Rev Genet       Date:  2013-02       Impact factor: 53.242

10.  RNAi pathways contribute to developmental history-dependent phenotypic plasticity in C. elegans.

Authors:  Sarah E Hall; Gung-Wei Chirn; Nelson C Lau; Piali Sengupta
Journal:  RNA       Date:  2013-01-17       Impact factor: 4.942

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