Literature DB >> 29395906

A Neuronal piRNA Pathway Inhibits Axon Regeneration in C. elegans.

Kyung Won Kim1, Ngang Heok Tang1, Matthew G Andrusiak1, Zilu Wu1, Andrew D Chisholm1, Yishi Jin2.   

Abstract

The PIWI-interacting RNA (piRNA) pathway has long been thought to function solely in the germline, but evidence for its functions in somatic cells is emerging. Here we report an unexpected role for the piRNA pathway in Caenorhabditis elegans sensory axon regeneration after injury. Loss of function in a subset of components of the piRNA pathway results in enhanced axon regrowth. Two essential piRNA factors, PRDE-1 and PRG-1/PIWI, inhibit axon regeneration in a gonad-independent and cell-autonomous manner. By smFISH analysis we find that prde-1 transcripts are present in neurons, as well as germ cells. The piRNA pathway inhibits axon regrowth independent of nuclear transcriptional silencing but dependent on the slicer domain of PRG-1/PIWI, suggesting that post-transcriptional gene silencing is involved. Our results reveal the neuronal piRNA pathway as a novel intrinsic repressor of axon regeneration.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Argonaute; D-D-H motif; PIWI; PRDE-1; PRG-1; neuronal injury; posttranscriptional gene silencing (PTGS); slicer activity; smFISH; small RNA

Mesh:

Substances:

Year:  2018        PMID: 29395906      PMCID: PMC5866297          DOI: 10.1016/j.neuron.2018.01.014

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   17.173


  49 in total

1.  Repurposing an endogenous degradation system for rapid and targeted depletion of C. elegans proteins.

Authors:  Stephen T Armenti; Lauren L Lohmer; David R Sherwood; Jeremy Nance
Journal:  Development       Date:  2014-11-05       Impact factor: 6.868

Review 2.  PIWI-Interacting RNA: Its Biogenesis and Functions.

Authors:  Yuka W Iwasaki; Mikiko C Siomi; Haruhiko Siomi
Journal:  Annu Rev Biochem       Date:  2015-03-05       Impact factor: 23.643

3.  Roles for small noncoding RNAs in silencing of retrotransposons in the mammalian brain.

Authors:  Sayan Nandi; Dhruva Chandramohan; Luana Fioriti; Ari M Melnick; Jean M Hébert; Christopher E Mason; Priyamvada Rajasethupathy; Eric R Kandel
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-24       Impact factor: 11.205

4.  The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements.

Authors:  Serena De Fazio; Nenad Bartonicek; Monica Di Giacomo; Cei Abreu-Goodger; Aditya Sankar; Charlotta Funaya; Claude Antony; Pedro N Moreira; Anton J Enright; Dónal O'Carroll
Journal:  Nature       Date:  2011-10-23       Impact factor: 49.962

5.  Analysis of piRNA-Like Small Non-coding RNAs Present in Axons of Adult Sensory Neurons.

Authors:  Monichan Phay; Hak Hee Kim; Soonmoon Yoo
Journal:  Mol Neurobiol       Date:  2016-12-13       Impact factor: 5.590

6.  Efficient marker-free recovery of custom genetic modifications with CRISPR/Cas9 in Caenorhabditis elegans.

Authors:  Joshua A Arribere; Ryan T Bell; Becky X H Fu; Karen L Artiles; Phil S Hartman; Andrew Z Fire
Journal:  Genetics       Date:  2014-08-26       Impact factor: 4.562

7.  A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice.

Authors:  Alexei A Aravin; Ravi Sachidanandam; Deborah Bourc'his; Christopher Schaefer; Dubravka Pezic; Katalin Fejes Toth; Timothy Bestor; Gregory J Hannon
Journal:  Mol Cell       Date:  2008-09-26       Impact factor: 17.970

8.  An Argonaute transports siRNAs from the cytoplasm to the nucleus.

Authors:  Shouhong Guang; Aaron F Bochner; Derek M Pavelec; Kirk B Burkhart; Sandra Harding; Jennifer Lachowiec; Scott Kennedy
Journal:  Science       Date:  2008-07-25       Impact factor: 47.728

9.  A role for neuronal piRNAs in the epigenetic control of memory-related synaptic plasticity.

Authors:  Priyamvada Rajasethupathy; Igor Antonov; Robert Sheridan; Sebastian Frey; Chris Sander; Thomas Tuschl; Eric R Kandel
Journal:  Cell       Date:  2012-04-27       Impact factor: 41.582

10.  PRDE-1 is a nuclear factor essential for the biogenesis of Ruby motif-dependent piRNAs in C. elegans.

Authors:  Eva-Maria Weick; Peter Sarkies; Nicola Silva; Ron A Chen; Sylviane M M Moss; Amy C Cording; Julie Ahringer; Enrique Martinez-Perez; Eric A Miska
Journal:  Genes Dev       Date:  2014-04-01       Impact factor: 11.361

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  18 in total

1.  The mRNA Decay Factor CAR-1/LSM14 Regulates Axon Regeneration via Mitochondrial Calcium Dynamics.

Authors:  Ngang Heok Tang; Kyung Won Kim; Suhong Xu; Stephen M Blazie; Brian A Yee; Gene W Yeo; Yishi Jin; Andrew D Chisholm
Journal:  Curr Biol       Date:  2020-01-23       Impact factor: 10.834

Review 2.  The Caenorhabditis elegans Transgenic Toolbox.

Authors:  Jeremy Nance; Christian Frøkjær-Jensen
Journal:  Genetics       Date:  2019-08       Impact factor: 4.562

3.  Multi-omic analysis elucidates the genetic basis of hydrocephalus.

Authors:  Andrew T Hale; Lisa Bastarache; Diego M Morales; John C Wellons; David D Limbrick; Eric R Gamazon
Journal:  Cell Rep       Date:  2021-05-04       Impact factor: 9.423

4.  The debatable presence of PIWI-interacting RNAs in invasive breast cancer.

Authors:  Emmi Kärkkäinen; Sami Heikkinen; Maria Tengström; Veli-Matti Kosma; Arto Mannermaa; Jaana M Hartikainen
Journal:  Cancer Med       Date:  2021-05-07       Impact factor: 4.452

Review 5.  piRNAs and endo-siRNAs: Small molecules with large roles in the nervous system.

Authors:  Maria C Ow; Sarah E Hall
Journal:  Neurochem Int       Date:  2021-05-31       Impact factor: 4.297

6.  Expanded genetic screening in Caenorhabditis elegans identifies new regulators and an inhibitory role for NAD+ in axon regeneration.

Authors:  Christopher A Piggott; Matthew G Andrusiak; Seungmee Park; Kyung Won Kim; Ngang Heok Tang; Ming Zhu; Naina Kurup; Salvatore J Cherra; Zilu Wu; Andrew D Chisholm; Yishi Jin
Journal:  Elife       Date:  2018-11-21       Impact factor: 8.140

7.  piRTarBase: a database of piRNA targeting sites and their roles in gene regulation.

Authors:  Wei-Sheng Wu; Jordan S Brown; Tsung-Te Chen; Yu-Han Chu; Wei-Che Huang; Shikui Tu; Heng-Chi Lee
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

8.  Site-Specific Expression Pattern of PIWI-Interacting RNA in Skin and Oral Mucosal Wound Healing.

Authors:  Lin Chen; Zujian Chen; Alyne Simões; Xinming Wu; Yang Dai; Luisa A DiPietro; Xiaofeng Zhou
Journal:  Int J Mol Sci       Date:  2020-01-14       Impact factor: 5.923

9.  Pericytes: Problems and Promises for CNS Repair.

Authors:  Fabio Laredo; Julia Plebanski; Andrea Tedeschi
Journal:  Front Cell Neurosci       Date:  2019-12-06       Impact factor: 5.505

Review 10.  PIWI Proteins and piRNAs in the Nervous System.

Authors:  Kyung Won Kim
Journal:  Mol Cells       Date:  2019-12-31       Impact factor: 5.034

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