Literature DB >> 18561189

Structural characterization of CalO2: a putative orsellinic acid P450 oxidase in the calicheamicin biosynthetic pathway.

Jason G McCoy1, Heather D Johnson, Shanteri Singh, Craig A Bingman, In-Kyoung Lei, Jon S Thorson, George N Phillips.   

Abstract

Although bacterial iterative Type I polyketide synthases are now known to participate in the biosynthesis of a small set of diverse natural products, the subsequent downstream modification of the resulting polyketide products remains poorly understood. Toward this goal, we report the X-ray structure determination at 2.5 A resolution and preliminary characterization of the putative orsellenic acid P450 oxidase (CalO2) involved in calicheamicin biosynthesis. These studies represent the first crystal structure for a P450 involved in modifying a bacterial iterative Type I polyketide product and suggest the CalO2-catalyzed step may occur after CalO3-catalyzed iodination and may also require a coenzyme A- (CoA) or acyl carrier protein- (ACP) bound substrate. Docking studies also reveal a putative docking site within CalO2 for the CLM orsellinic acid synthase (CalO5) ACP domain which involves a well-ordered helix along the CalO2 active site cavity that is unique compared with other P450 structures. (c) 2008 Wiley-Liss, Inc.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 18561189      PMCID: PMC2742692          DOI: 10.1002/prot.22131

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  52 in total

1.  ZDOCK: an initial-stage protein-docking algorithm.

Authors:  Rong Chen; Li Li; Zhiping Weng
Journal:  Proteins       Date:  2003-07-01

Review 2.  Arming antibodies: prospects and challenges for immunoconjugates.

Authors:  Anna M Wu; Peter D Senter
Journal:  Nat Biotechnol       Date:  2005-09       Impact factor: 54.908

3.  Coumarin formation in novobiocin biosynthesis: beta-hydroxylation of the aminoacyl enzyme tyrosyl-S-NovH by a cytochrome P450 NovI.

Authors:  H Chen; C T Walsh
Journal:  Chem Biol       Date:  2001-04

4.  Genetic characterization of the chlorothricin gene cluster as a model for spirotetronate antibiotic biosynthesis.

Authors:  Xin-Ying Jia; Zhen-Hua Tian; Lei Shao; Xu-Dong Qu; Qun-Fei Zhao; Jian Tang; Gong-Li Tang; Wen Liu
Journal:  Chem Biol       Date:  2006-06

5.  The neocarzinostatin biosynthetic gene cluster from Streptomyces carzinostaticus ATCC 15944 involving two iterative type I polyketide synthases.

Authors:  Wen Liu; Koichi Nonaka; Liping Nie; Jian Zhang; Steven D Christenson; Juyun Bae; Steven G Van Lanen; Emmanuel Zazopoulos; Chris M Farnet; Catherine F Yang; Ben Shen
Journal:  Chem Biol       Date:  2005-03

6.  Solution structure of the calicheamicin gamma 1I-DNA complex.

Authors:  R A Kumar; N Ikemoto; D J Patel
Journal:  J Mol Biol       Date:  1997-01-17       Impact factor: 5.469

Review 7.  Polyketide biosynthesis beyond the type I, II and III polyketide synthase paradigms.

Authors:  Ben Shen
Journal:  Curr Opin Chem Biol       Date:  2003-04       Impact factor: 8.822

8.  Neocarzinostatin naphthoate synthase: an unique iterative type I PKS from neocarzinostatin producer Streptomyces carzinostaticus.

Authors:  Basundhara Sthapit; Tae-Jin Oh; Rajan Lamichhane; Kwangkyoung Liou; Hei Chan Lee; Chun-Gyu Kim; Jae Kyung Sohng
Journal:  FEBS Lett       Date:  2004-05-21       Impact factor: 4.124

Review 9.  Enediyne natural products: biosynthesis and prospect towards engineering novel antitumor agents.

Authors:  Ben Shen; Wen Liu; Koichi Nonaka
Journal:  Curr Med Chem       Date:  2003-11       Impact factor: 4.530

10.  Key residues responsible for acyl carrier protein and beta-ketoacyl-acyl carrier protein reductase (FabG) interaction.

Authors:  Yong-Mei Zhang; Bainan Wu; Jie Zheng; Charles O Rock
Journal:  J Biol Chem       Date:  2003-10-03       Impact factor: 5.157

View more
  7 in total

Review 1.  Heteroatom-Heteroatom Bond Formation in Natural Product Biosynthesis.

Authors:  Abraham J Waldman; Tai L Ng; Peng Wang; Emily P Balskus
Journal:  Chem Rev       Date:  2017-04-04       Impact factor: 60.622

Review 2.  Diversity of P450 enzymes in the biosynthesis of natural products.

Authors:  Larissa M Podust; David H Sherman
Journal:  Nat Prod Rep       Date:  2012-07-23       Impact factor: 13.423

3.  Structural characterization of CalO1: a putative orsellinic acid methyltransferase in the calicheamicin-biosynthetic pathway.

Authors:  Aram Chang; Shanteri Singh; Craig A Bingman; Jon S Thorson; George N Phillips
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-02-15

4.  DOT2: Macromolecular docking with improved biophysical models.

Authors:  Victoria A Roberts; Elaine E Thompson; Michael E Pique; Martin S Perez; L F Ten Eyck
Journal:  J Comput Chem       Date:  2013-05-21       Impact factor: 3.376

5.  Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.

Authors:  Kathryn M McCulloch; Emilianne K McCranie; Jarrod A Smith; Maruf Sarwar; Jeannette L Mathieu; Bryan L Gitschlag; Yu Du; Brian O Bachmann; T M Iverson
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-03       Impact factor: 11.205

6.  Structural insights into the mechanism for recognizing substrate of the cytochrome P450 enzyme TxtE.

Authors:  Feng Yu; Minjun Li; Chunyan Xu; Zhijun Wang; Huan Zhou; Min Yang; Yaxing Chen; Lin Tang; Jianhua He
Journal:  PLoS One       Date:  2013-11-25       Impact factor: 3.240

7.  Structural characterization of CYP144A1 - a cytochrome P450 enzyme expressed from alternative transcripts in Mycobacterium tuberculosis.

Authors:  Jude Chenge; Madeline E Kavanagh; Max D Driscoll; Kirsty J McLean; Douglas B Young; Teresa Cortes; Dijana Matak-Vinkovic; Colin W Levy; Stephen E J Rigby; David Leys; Chris Abell; Andrew W Munro
Journal:  Sci Rep       Date:  2016-05-26       Impact factor: 4.379

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.