Literature DB >> 18513977

A functional proline switch in cytochrome P450cam.

Bo OuYang1, Susan Sondej Pochapsky, Marina Dang, Thomas C Pochapsky.   

Abstract

The two-protein complex between putidaredoxin (Pdx) and cytochrome P450(cam) (CYP101) is the catalytically competent species for camphor hydroxylation by CYP101. We detected a conformational change in CYP101 upon binding of Pdx that reorients bound camphor appropriately for hydroxylation. Experimental evidence shows that binding of Pdx converts a single X-proline amide bond in CYP101 from trans or distorted trans to cis. Mutation of proline 89 to isoleucine yields a mixture of both bound camphor orientations, that seen in Pdx-free and that seen in Pdx-bound CYP101. A mutation in CYP101 that destabilizes the cis conformer of the Ile 88-Pro 89 amide bond results in weaker binding of Pdx. This work provides direct experimental evidence for involvement of X-proline isomerization in enzyme function.

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Year:  2008        PMID: 18513977      PMCID: PMC2581830          DOI: 10.1016/j.str.2008.03.011

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  39 in total

1.  Cis peptide bonds in proteins: residues involved, their conformations, interactions and locations.

Authors:  D Pal; P Chakrabarti
Journal:  J Mol Biol       Date:  1999-11-19       Impact factor: 5.469

2.  Conformational dynamics of substrate in the active site of cytochrome P450 BM-3/NPG complex: insights from NMR order parameters.

Authors:  Krishna Pratap Ravindranathan; Emilio Gallicchio; Ann E McDermott; Ronald M Levy
Journal:  J Am Chem Soc       Date:  2007-01-24       Impact factor: 15.419

Review 3.  Structural biology of p450-oxy complexes.

Authors:  Thomas L Poulos
Journal:  Drug Metab Rev       Date:  2007       Impact factor: 4.518

4.  High-resolution crystal structure of cytochrome P450cam.

Authors:  T L Poulos; B C Finzel; A J Howard
Journal:  J Mol Biol       Date:  1987-06-05       Impact factor: 5.469

5.  The catalytic pathway of cytochrome p450cam at atomic resolution.

Authors:  I Schlichting; J Berendzen; K Chu; A M Stock; S A Maves; D E Benson; R M Sweet; D Ringe; G A Petsko; S G Sligar
Journal:  Science       Date:  2000-03-03       Impact factor: 47.728

6.  Specific effects of potassium ion binding on wild-type and L358P cytochrome P450cam.

Authors:  Bo OuYang; Susan Sondej Pochapsky; Gina M Pagani; Thomas C Pochapsky
Journal:  Biochemistry       Date:  2006-12-05       Impact factor: 3.162

7.  Interaction between mitochondrial CYP27B1 and adrenodoxin: role of arginine 458 of mouse CYP27B1.

Authors:  Naoko Urushino; Keiko Yamamoto; Norio Kagawa; Shinichi Ikushiro; Masaki Kamakura; Sachiko Yamada; Shigeaki Kato; Kuniyo Inouye; Toshiyuki Sakaki
Journal:  Biochemistry       Date:  2006-04-11       Impact factor: 3.162

8.  Proline cis-trans isomerization controls autoinhibition of a signaling protein.

Authors:  Paramita Sarkar; Charles Reichman; Tamjeed Saleh; Raymond B Birge; Charalampos G Kalodimos
Journal:  Mol Cell       Date:  2007-02-09       Impact factor: 17.970

9.  Structural evidence for a functionally relevant second camphor binding site in P450cam: model for substrate entry into a P450 active site.

Authors:  Huili Yao; Christopher R McCullough; Aurora D Costache; Phani Kumar Pullela; Daniel S Sem
Journal:  Proteins       Date:  2007-10-01

10.  Comparison of the complexes formed by cytochrome P450cam with cytochrome b5 and putidaredoxin, two effectors of camphor hydroxylase activity.

Authors:  Lingyun Rui; Susan Sondej Pochapsky; Thomas C Pochapsky
Journal:  Biochemistry       Date:  2006-03-28       Impact factor: 3.162

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  27 in total

Review 1.  Conformational plasticity and structure/function relationships in cytochromes P450.

Authors:  Thomas C Pochapsky; Sophia Kazanis; Marina Dang
Journal:  Antioxid Redox Signal       Date:  2010-10       Impact factor: 8.401

2.  Unexpected Differences between Two Closely Related Bacterial P450 Camphor Monooxygenases.

Authors:  Vidhi C Murarka; Dipanwita Batabyal; Jose A Amaya; Irina F Sevrioukova; Thomas L Poulos
Journal:  Biochemistry       Date:  2020-07-15       Impact factor: 3.162

3.  Spring-loading the active site of cytochrome P450cam.

Authors:  Marina Dang; Susan Sondej Pochapsky; Thomas C Pochapsky
Journal:  Metallomics       Date:  2010-12-24       Impact factor: 4.526

4.  P450cam visits an open conformation in the absence of substrate.

Authors:  Young-Tae Lee; Richard F Wilson; Igor Rupniewski; David B Goodin
Journal:  Biochemistry       Date:  2010-04-27       Impact factor: 3.162

Review 5.  NMR reveals novel mechanisms of protein activity regulation.

Authors:  Charalampos G Kalodimos
Journal:  Protein Sci       Date:  2011-04-08       Impact factor: 6.725

6.  Delicate conformational balance of the redox enzyme cytochrome P450cam.

Authors:  Simon P Skinner; Wei-Min Liu; Yoshitaka Hiruma; Monika Timmer; Anneloes Blok; Mathias A S Hass; Marcellus Ubbink
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-30       Impact factor: 11.205

Review 7.  Spectroscopic studies of the cytochrome P450 reaction mechanisms.

Authors:  Piotr J Mak; Ilia G Denisov
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2017-06-28       Impact factor: 3.036

8.  Some Surprising Implications of NMR-directed Simulations of Substrate Recognition and Binding by Cytochrome P450cam (CYP101A1).

Authors:  Eliana K Asciutto; Thomas C Pochapsky
Journal:  J Mol Biol       Date:  2018-03-27       Impact factor: 5.469

9.  Solution Conformations and Dynamics of Substrate-Bound Cytochrome P450 MycG.

Authors:  Drew R Tietz; Larissa M Podust; David H Sherman; Thomas C Pochapsky
Journal:  Biochemistry       Date:  2017-05-16       Impact factor: 3.162

10.  A remote prolyl isomerization controls domain assembly via a hydrogen bonding network.

Authors:  Ulrich Weininger; Roman P Jakob; Barbara Eckert; Kristian Schweimer; Franz X Schmid; Jochen Balbach
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-15       Impact factor: 11.205

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