Literature DB >> 18454154

Improving the photostability of bright monomeric orange and red fluorescent proteins.

Nathan C Shaner1, Michael Z Lin, Michael R McKeown, Paul A Steinbach, Kristin L Hazelwood, Michael W Davidson, Roger Y Tsien.   

Abstract

All organic fluorophores undergo irreversible photobleaching during prolonged illumination. Although fluorescent proteins typically bleach at a substantially slower rate than many small-molecule dyes, in many cases the lack of sufficient photostability remains an important limiting factor for experiments requiring large numbers of images of single cells. Screening methods focusing solely on brightness or wavelength are highly effective in optimizing both properties, but the absence of selective pressure for photostability in such screens leads to unpredictable photobleaching behavior in the resulting fluorescent proteins. Here we describe an assay for screening libraries of fluorescent proteins for enhanced photostability. With this assay, we developed highly photostable variants of mOrange (a wavelength-shifted monomeric derivative of DsRed from Discosoma sp.) and TagRFP (a monomeric derivative of eqFP578 from Entacmaea quadricolor) that maintain most of the beneficial qualities of the original proteins and perform as reliably as Aequorea victoria GFP derivatives in fusion constructs.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18454154      PMCID: PMC2853173          DOI: 10.1038/nmeth.1209

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  32 in total

1.  A monomeric red fluorescent protein.

Authors:  Robert E Campbell; Oded Tour; Amy E Palmer; Paul A Steinbach; Geoffrey S Baird; David A Zacharias; Roger Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

2.  Chromophore environment provides clue to "kindling fluorescent protein" riddle.

Authors:  Dmitriy M Chudakov; Alexei V Feofanov; Nikolay N Mudrik; Sergey Lukyanov; Konstantin A Lukyanov
Journal:  J Biol Chem       Date:  2002-12-19       Impact factor: 5.157

3.  An optical marker based on the UV-induced green-to-red photoconversion of a fluorescent protein.

Authors:  Ryoko Ando; Hiroshi Hama; Miki Yamamoto-Hino; Hideaki Mizuno; Atsushi Miyawaki
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-23       Impact factor: 11.205

Review 4.  A guide to choosing fluorescent proteins.

Authors:  Nathan C Shaner; Paul A Steinbach; Roger Y Tsien
Journal:  Nat Methods       Date:  2005-12       Impact factor: 28.547

5.  Structure and mechanism of the reversible photoswitch of a fluorescent protein.

Authors:  Martin Andresen; Markus C Wahl; André C Stiel; Frauke Gräter; Lars V Schäfer; Simon Trowitzsch; Gert Weber; Christian Eggeling; Helmut Grubmüller; Stefan W Hell; Stefan Jakobs
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-31       Impact factor: 11.205

Review 6.  Innovation: Photoactivatable fluorescent proteins.

Authors:  Konstantin A Lukyanov; Dmitry M Chudakov; Sergey Lukyanov; Vladislav V Verkhusha
Journal:  Nat Rev Mol Cell Biol       Date:  2005-11       Impact factor: 94.444

7.  A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications.

Authors:  Takeharu Nagai; Keiji Ibata; Eun Sun Park; Mie Kubota; Katsuhiko Mikoshiba; Atsushi Miyawaki
Journal:  Nat Biotechnol       Date:  2002-01       Impact factor: 54.908

8.  Phototransformation of green fluorescent protein with UV and visible light leads to decarboxylation of glutamate 222.

Authors:  Jasper J van Thor; Thomas Gensch; Klaas J Hellingwerf; Louise N Johnson
Journal:  Nat Struct Biol       Date:  2002-01

9.  Reversible single-molecule photoswitching in the GFP-like fluorescent protein Dronpa.

Authors:  Satoshi Habuchi; Ryoko Ando; Peter Dedecker; Wendy Verheijen; Hideaki Mizuno; Atsushi Miyawaki; Johan Hofkens
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-22       Impact factor: 11.205

10.  Reducing the environmental sensitivity of yellow fluorescent protein. Mechanism and applications.

Authors:  O Griesbeck; G S Baird; R E Campbell; D A Zacharias; R Y Tsien
Journal:  J Biol Chem       Date:  2001-05-31       Impact factor: 5.157

View more
  432 in total

1.  Phase differential enhancement of FLIM to distinguish FRET components of a biosensor for monitoring molecular activity of Membrane Type 1 Matrix Metalloproteinase in live cells.

Authors:  John Paul Eichorst; He Huang; Robert M Clegg; Yingxiao Wang
Journal:  J Fluoresc       Date:  2011-04-26       Impact factor: 2.217

2.  Fluorescent protein barrel fluctuations and oxygen diffusion pathways in mCherry.

Authors:  Prem P Chapagain; Chola K Regmi; William Castillo
Journal:  J Chem Phys       Date:  2011-12-21       Impact factor: 3.488

3.  Rabenosyn-5 defines the fate of the transferrin receptor following clathrin-mediated endocytosis.

Authors:  Deanna M Navaroli; Karl D Bellvé; Clive Standley; Lawrence M Lifshitz; James Cardia; David Lambright; Deborah Leonard; Kevin E Fogarty; Silvia Corvera
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

4.  Quantification of fluorophore copy number from intrinsic fluctuations during fluorescence photobleaching.

Authors:  Chitra R Nayak; Andrew D Rutenberg
Journal:  Biophys J       Date:  2011-11-01       Impact factor: 4.033

Review 5.  Structural neurobiology: missing link to a mechanistic understanding of neural computation.

Authors:  Winfried Denk; Kevin L Briggman; Moritz Helmstaedter
Journal:  Nat Rev Neurosci       Date:  2012-02-22       Impact factor: 34.870

Review 6.  Proteins on the move: insights gained from fluorescent protein technologies.

Authors:  Atsushi Miyawaki
Journal:  Nat Rev Mol Cell Biol       Date:  2011-09-23       Impact factor: 94.444

Review 7.  Where microbiology meets microengineering: design and applications of reporter bacteria.

Authors:  Jan Roelof van der Meer; Shimshon Belkin
Journal:  Nat Rev Microbiol       Date:  2010-07       Impact factor: 60.633

Review 8.  Noninvasive biophotonic imaging for studies of infectious disease.

Authors:  Nuria Andreu; Andrea Zelmer; Siouxsie Wiles
Journal:  FEMS Microbiol Rev       Date:  2010-10-19       Impact factor: 16.408

9.  Directed Evolution to Engineer Monobody for FRET Biosensor Assembly and Imaging at Live-Cell Surface.

Authors:  Praopim Limsakul; Qin Peng; Yiqian Wu; Molly E Allen; Jing Liang; Albert G Remacle; Tyler Lopez; Xin Ge; Brian K Kay; Huimin Zhao; Alex Y Strongin; Xiang-Lei Yang; Shaoying Lu; Yingxiao Wang
Journal:  Cell Chem Biol       Date:  2018-01-27       Impact factor: 8.116

10.  Regulator of G-protein signaling-21 (RGS21) is an inhibitor of bitter gustatory signaling found in lingual and airway epithelia.

Authors:  Staci P Cohen; Brian K Buckley; Mickey Kosloff; Alaina L Garland; Dustin E Bosch; Gang Cheng; Harish Radhakrishna; Michael D Brown; Francis S Willard; Vadim Y Arshavsky; Robert Tarran; David P Siderovski; Adam J Kimple
Journal:  J Biol Chem       Date:  2012-10-24       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.