Literature DB >> 21941275

Proteins on the move: insights gained from fluorescent protein technologies.

Atsushi Miyawaki1.   

Abstract

Proteins are always on the move, and this may occur through diffusion or active transport. The realization that the regulation of signal transduction is highly dynamic in space and time has stimulated intense interest in the movement of proteins. Over the past decade, numerous new technologies using fluorescent proteins have been developed, allowing us to observe the spatiotemporal dynamics of proteins in living cells. These technologies have greatly advanced our understanding of protein dynamics, including protein movement and protein interactions.

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Year:  2011        PMID: 21941275     DOI: 10.1038/nrm3199

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  138 in total

1.  Lateral propagation of EGF signaling after local stimulation is dependent on receptor density.

Authors:  Asako Sawano; Shuichi Takayama; Michiyuki Matsuda; Atsushi Miyawaki
Journal:  Dev Cell       Date:  2002-08       Impact factor: 12.270

2.  Determining protease activity in vivo by fluorescence cross-correlation analysis.

Authors:  Tobias Kohl; Elke Haustein; Petra Schwille
Journal:  Biophys J       Date:  2005-07-29       Impact factor: 4.033

Review 3.  Quantitative fluorescent speckle microscopy of cytoskeleton dynamics.

Authors:  Gaudenz Danuser; Clare M Waterman-Storer
Journal:  Annu Rev Biophys Biomol Struct       Date:  2006

4.  Highlighted generation of fluorescence signals using simultaneous two-color irradiation on Dronpa mutants.

Authors:  Ryoko Ando; Cristina Flors; Hideaki Mizuno; Johan Hofkens; Atsushi Miyawaki
Journal:  Biophys J       Date:  2007-03-23       Impact factor: 4.033

5.  High-density mapping of single-molecule trajectories with photoactivated localization microscopy.

Authors:  Suliana Manley; Jennifer M Gillette; George H Patterson; Hari Shroff; Harald F Hess; Eric Betzig; Jennifer Lippincott-Schwartz
Journal:  Nat Methods       Date:  2008-01-13       Impact factor: 28.547

6.  Generation of monomeric reversibly switchable red fluorescent proteins for far-field fluorescence nanoscopy.

Authors:  Andre C Stiel; Martin Andresen; Hannes Bock; Michael Hilbert; Jessica Schilde; Andreas Schönle; Christian Eggeling; Alexander Egner; Stefan W Hell; Stefan Jakobs
Journal:  Biophys J       Date:  2008-07-25       Impact factor: 4.033

7.  Modular scanning FCS quantifies receptor-ligand interactions in living multicellular organisms.

Authors:  Jonas Ries; Shuizi Rachel Yu; Markus Burkhardt; Michael Brand; Petra Schwille
Journal:  Nat Methods       Date:  2009-08-02       Impact factor: 28.547

Review 8.  Signaling from the living plasma membrane.

Authors:  Hernán E Grecco; Malte Schmick; Philippe I H Bastiaens
Journal:  Cell       Date:  2011-03-18       Impact factor: 41.582

9.  Rapid diffusion of green fluorescent protein in the mitochondrial matrix.

Authors:  A Partikian; B Olveczky; R Swaminathan; Y Li; A S Verkman
Journal:  J Cell Biol       Date:  1998-02-23       Impact factor: 10.539

10.  A photoswitchable orange-to-far-red fluorescent protein, PSmOrange.

Authors:  Oksana M Subach; George H Patterson; Li-Min Ting; Yarong Wang; John S Condeelis; Vladislav V Verkhusha
Journal:  Nat Methods       Date:  2011-07-31       Impact factor: 28.547

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  43 in total

1.  Assay of bacteriorhodopsin stability on polycarbonate surface by using of FTIR-ATR: a model of disk-based bioassays.

Authors:  Ahmad Molaeirad; Amineh Leilabadi Asl; Maryam Khayati; Mahdi Alijanianzadeh
Journal:  J Bioenerg Biomembr       Date:  2015-07-08       Impact factor: 2.945

Review 2.  Molecular diffusion and binding analyzed with FRAP.

Authors:  Malte Wachsmuth
Journal:  Protoplasma       Date:  2014-01-04       Impact factor: 3.356

3.  Measuring protein stability in living zebrafish embryos using fluorescence decay after photoconversion (FDAP).

Authors:  Katherine W Rogers; Alexander Blässle; Alexander F Schier; Patrick Müller
Journal:  J Vis Exp       Date:  2015-01-28       Impact factor: 1.355

4.  Live-cell fluorescence microscopy with molecular biosensors: what are we really measuring?

Authors:  Jason M Haugh
Journal:  Biophys J       Date:  2012-05-02       Impact factor: 4.033

5.  Evaluation of fluorophores to label SNAP-tag fused proteins for multicolor single-molecule tracking microscopy in live cells.

Authors:  Peter J Bosch; Ivan R Corrêa; Michael H Sonntag; Jenny Ibach; Luc Brunsveld; Johannes S Kanger; Vinod Subramaniam
Journal:  Biophys J       Date:  2014-08-19       Impact factor: 4.033

6.  Classification of dynamical diffusion states in single molecule tracking microscopy.

Authors:  Peter J Bosch; Johannes S Kanger; Vinod Subramaniam
Journal:  Biophys J       Date:  2014-08-05       Impact factor: 4.033

Review 7.  Advances in whole-embryo imaging: a quantitative transition is underway.

Authors:  Periklis Pantazis; Willy Supatto
Journal:  Nat Rev Mol Cell Biol       Date:  2014-04-16       Impact factor: 94.444

8.  A FRET-facilitated photoswitching using an orange fluorescent protein with the fast photoconversion kinetics.

Authors:  Oksana M Subach; David Entenberg; John S Condeelis; Vladislav V Verkhusha
Journal:  J Am Chem Soc       Date:  2012-08-27       Impact factor: 15.419

9.  Definitive localization of intracellular proteins: Novel approach using CRISPR-Cas9 genome editing, with glucose 6-phosphate dehydrogenase as a model.

Authors:  Netanya Y Spencer; Ziying Yan; Le Cong; Yulong Zhang; John F Engelhardt; Robert C Stanton
Journal:  Anal Biochem       Date:  2015-11-11       Impact factor: 3.365

Review 10.  Exosomes in cancer development, metastasis, and drug resistance: a comprehensive review.

Authors:  Asfar S Azmi; Bin Bao; Fazlul H Sarkar
Journal:  Cancer Metastasis Rev       Date:  2013-12       Impact factor: 9.264

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