Literature DB >> 18452587

Large-scale transposon mutagenesis of Mycoplasma pulmonis.

Christopher T French1, Ping Lao, Ann E Loraine, Brian T Matthews, Huilan Yu, Kevin Dybvig.   

Abstract

To obtain mutants for the study of the basic biology and pathogenic mechanisms of mycoplasmas, the insertion site of transposon Tn4001T was determined for 1700 members of a library of Mycoplasma pulmonis mutants. After evaluating several criteria for gene disruption, we concluded that 321 of the 782 protein coding regions were inactivated. The dispensable and essential genes of M. pulmonis were compared with those reported for Mycoplasma genitalium and Bacillus subtilis. Perhaps the most surprising result of the current study was that unlike other bacteria, ribosomal proteins S18 and L28 were dispensable. Carbohydrate transport and the susceptibility of selected mutants to UV irradiation were examined to assess whether active transposition of Tn4001T within the genome would confound phenotypic analysis. In contrast to earlier reports suggesting that mycoplasmas were limited in their DNA repair machinery, mutations in recA, uvrA, uvrB and uvrC resulted in a DNA-repair deficient phenotype. A mutant with a defect in transport of N-acetylglucosamine was identified.

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Year:  2008        PMID: 18452587      PMCID: PMC2453687          DOI: 10.1111/j.1365-2958.2008.06262.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  34 in total

1.  Gene transfer in Mycoplasma pulmonis.

Authors:  Amy M Teachman; C Todd French; Huilan Yu; Warren L Simmons; Kevin Dybvig
Journal:  J Bacteriol       Date:  2002-02       Impact factor: 3.490

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Authors:  Y Ji; B Zhang; S F Van; P Warren; G Woodnutt; M K Burnham; M Rosenberg
Journal:  Science       Date:  2001-09-21       Impact factor: 47.728

3.  Essential Bacillus subtilis genes.

Authors:  K Kobayashi; S D Ehrlich; A Albertini; G Amati; K K Andersen; M Arnaud; K Asai; S Ashikaga; S Aymerich; P Bessieres; F Boland; S C Brignell; S Bron; K Bunai; J Chapuis; L C Christiansen; A Danchin; M Débarbouille; E Dervyn; E Deuerling; K Devine; S K Devine; O Dreesen; J Errington; S Fillinger; S J Foster; Y Fujita; A Galizzi; R Gardan; C Eschevins; T Fukushima; K Haga; C R Harwood; M Hecker; D Hosoya; M F Hullo; H Kakeshita; D Karamata; Y Kasahara; F Kawamura; K Koga; P Koski; R Kuwana; D Imamura; M Ishimaru; S Ishikawa; I Ishio; D Le Coq; A Masson; C Mauël; R Meima; R P Mellado; A Moir; S Moriya; E Nagakawa; H Nanamiya; S Nakai; P Nygaard; M Ogura; T Ohanan; M O'Reilly; M O'Rourke; Z Pragai; H M Pooley; G Rapoport; J P Rawlins; L A Rivas; C Rivolta; A Sadaie; Y Sadaie; M Sarvas; T Sato; H H Saxild; E Scanlan; W Schumann; J F M L Seegers; J Sekiguchi; A Sekowska; S J Séror; M Simon; P Stragier; R Studer; H Takamatsu; T Tanaka; M Takeuchi; H B Thomaides; V Vagner; J M van Dijl; K Watabe; A Wipat; H Yamamoto; M Yamamoto; Y Yamamoto; K Yamane; K Yata; K Yoshida; H Yoshikawa; U Zuber; N Ogasawara
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-07       Impact factor: 11.205

4.  A unique, bifunctional site-specific DNA recombinase from Mycoplasma pulmonis.

Authors:  Ramakrishnan Sitaraman; Amy M Denison; Kevin Dybvig
Journal:  Mol Microbiol       Date:  2002-11       Impact factor: 3.501

5.  The complete genome sequence of the murine respiratory pathogen Mycoplasma pulmonis.

Authors:  I Chambaud; R Heilig; S Ferris; V Barbe; D Samson; F Galisson; I Moszer; K Dybvig; H Wróblewski; A Viari; E P Rocha; A Blanchard
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

6.  Global transposon mutagenesis and a minimal Mycoplasma genome.

Authors:  C A Hutchison; S N Peterson; S R Gill; R T Cline; O White; C M Fraser; H O Smith; J C Venter
Journal:  Science       Date:  1999-12-10       Impact factor: 47.728

7.  Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli.

Authors:  Mikhail Bubunenko; Teresa Baker; Donald L Court
Journal:  J Bacteriol       Date:  2007-02-02       Impact factor: 3.490

8.  Systematic identification of selective essential genes in Helicobacter pylori by genome prioritization and allelic replacement mutagenesis.

Authors:  A F Chalker; H W Minehart; N J Hughes; K K Koretke; M A Lonetto; K K Brinkman; P V Warren; A Lupas; M J Stanhope; J R Brown; P S Hoffman
Journal:  J Bacteriol       Date:  2001-02       Impact factor: 3.490

9.  Variations in the surface proteins and restriction enzyme systems of Mycoplasma pulmonis in the respiratory tract of infected rats.

Authors:  J Gumulak-Smith; A Teachman; A H Tu; J W Simecka; J R Lindsey; K Dybvig
Journal:  Mol Microbiol       Date:  2001-05       Impact factor: 3.501

10.  Genomic repeats, genome plasticity and the dynamics of Mycoplasma evolution.

Authors:  Eduardo P C Rocha; Alain Blanchard
Journal:  Nucleic Acids Res       Date:  2002-05-01       Impact factor: 16.971

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  68 in total

Review 1.  How to make a minimal genome for synthetic minimal cell.

Authors:  Liu-Yan Zhang; Su-Hua Chang; Jing Wang
Journal:  Protein Cell       Date:  2010-06-04       Impact factor: 14.870

2.  Fewer essential genes in mycoplasmas than previous studies suggest.

Authors:  Kevin Dybvig; Ping Lao; David S Jordan; Warren L Simmons
Journal:  FEMS Microbiol Lett       Date:  2010-08-16       Impact factor: 2.742

3.  c-di-AMP secreted by intracellular Listeria monocytogenes activates a host type I interferon response.

Authors:  Joshua J Woodward; Anthony T Iavarone; Daniel A Portnoy
Journal:  Science       Date:  2010-05-27       Impact factor: 47.728

4.  DhhP, a cyclic di-AMP phosphodiesterase of Borrelia burgdorferi, is essential for cell growth and virulence.

Authors:  Meiping Ye; Jun-Jie Zhang; Xin Fang; Gavin B Lawlis; Bryan Troxell; Yan Zhou; Mark Gomelsky; Yongliang Lou; X Frank Yang
Journal:  Infect Immun       Date:  2014-02-24       Impact factor: 3.441

5.  Non-essential ribosomal proteins in bacteria and archaea identified using COGs.

Authors:  Michael Y Galperin; Yuri I Wolf; Sofya K Garushyants; Roberto Vera Alvarez; Eugene V Koonin
Journal:  J Bacteriol       Date:  2021-03-22       Impact factor: 3.490

Review 6.  Minimal Cells-Real and Imagined.

Authors:  John I Glass; Chuck Merryman; Kim S Wise; Clyde A Hutchison; Hamilton O Smith
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-12-01       Impact factor: 10.005

7.  The transfer-messenger RNA-small protein B system plays a role in avian pathogenic Escherichia coli pathogenicity.

Authors:  Xiaohui Mu; Haixia Huan; Huiqing Xu; Qingqing Gao; Liping Xiong; Ruxia Gao; Song Gao; Xiufan Liu
Journal:  J Bacteriol       Date:  2013-09-06       Impact factor: 3.490

8.  O-linked protein glycosylation in Mycoplasma.

Authors:  David S Jordan; James M Daubenspeck; Audra H Laube; Matthew B Renfrow; Kevin Dybvig
Journal:  Mol Microbiol       Date:  2013-10-18       Impact factor: 3.501

9.  Localization of P42 and F(1)-ATPase α-subunit homolog of the gliding machinery in Mycoplasma mobile revealed by newly developed gene manipulation and fluorescent protein tagging.

Authors:  Isil Tulum; Masaru Yabe; Atsuko Uenoyama; Makoto Miyata
Journal:  J Bacteriol       Date:  2014-02-07       Impact factor: 3.490

10.  Life on arginine for Mycoplasma hominis: clues from its minimal genome and comparison with other human urogenital mycoplasmas.

Authors:  Sabine Pereyre; Pascal Sirand-Pugnet; Laure Beven; Alain Charron; Hélène Renaudin; Aurélien Barré; Philippe Avenaud; Daniel Jacob; Arnaud Couloux; Valérie Barbe; Antoine de Daruvar; Alain Blanchard; Cécile Bébéar
Journal:  PLoS Genet       Date:  2009-10-09       Impact factor: 5.917

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