Literature DB >> 18373062

Deoxyribozymes: useful DNA catalysts in vitro and in vivo.

D A Baum1, S K Silverman.   

Abstract

Deoxyribozymes (DNA enzymes; DNAzymes) are catalytic DNA sequences. Using the technique of in vitro selection, individual deoxyribozymes have been identified that catalyze RNA cleavage, RNA ligation, and a growing range of other chemical reactions. DNA enzymes have been used in vitro for applications such as biochemical RNA manipulation and analytical assays for metal ions, small organic compounds, oligonucleotides, and proteins. Deoxyribozymes have also been utilized as in vivo therapeutic agents to destroy specific mRNA targets. Although many conceptual and practical challenges remain to be addressed, deoxyribozymes have substantial promise to contribute meaningfully for applications both in vitro and in vivo.

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Year:  2008        PMID: 18373062      PMCID: PMC7079777          DOI: 10.1007/s00018-008-8029-y

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  40 in total

1.  DNA-catalyzed serine side chain reactivity and selectivity.

Authors:  Amit Sachdeva; Scott K Silverman
Journal:  Chem Commun (Camb)       Date:  2010-02-25       Impact factor: 6.222

Review 2.  Functional nucleic acid sensors.

Authors:  Juewen Liu; Zehui Cao; Yi Lu
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

3.  Convergent and general one-step DNA-catalyzed synthesis of multiply branched DNA.

Authors:  Timothy P Mui; Scott K Silverman
Journal:  Org Lett       Date:  2008-09-23       Impact factor: 6.005

Review 4.  Designed and Evolved Nucleic Acid Nanotechnology: Contrast and Complementarity.

Authors:  Tulsi Ram Damase; Peter B Allen
Journal:  Bioconjug Chem       Date:  2019-01-03       Impact factor: 4.774

5.  Nucleic acid detection using MNAzymes.

Authors:  Yulia V Gerasimova; Dmitry M Kolpashchikov
Journal:  Chem Biol       Date:  2010-02-26

6.  Cleavage-based signal amplification of RNA.

Authors:  Yongyun Zhao; Li Zhou; Zhuo Tang
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

7.  Enhanced deoxyribozyme-catalyzed RNA ligation in the presence of organic cosolvents.

Authors:  Anit K Behera; Kelsey J Schlund; Allen J Mason; Kennedy O Alila; Mengyu Han; Rebecca L Grout; Dana A Baum
Journal:  Biopolymers       Date:  2013-06       Impact factor: 2.505

8.  DNAzyme-mediated catalysis with only guanosine and cytidine nucleotides.

Authors:  Kenny Schlosser; Yingfu Li
Journal:  Nucleic Acids Res       Date:  2008-12-02       Impact factor: 16.971

9.  Enhanced functional potential of nucleic acid aptamer libraries patterned to increase secondary structure.

Authors:  Karen M Ruff; Thomas M Snyder; David R Liu
Journal:  J Am Chem Soc       Date:  2010-07-14       Impact factor: 15.419

10.  Turning the 10-23 DNAzyme on and off with light.

Authors:  Julia L Richards; Garry K Seward; Yu-Hsiu Wang; Ivan J Dmochowski
Journal:  Chembiochem       Date:  2010-02-15       Impact factor: 3.164

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