Literature DB >> 18359249

Determination of quantitative distributions of heavy-metal stain in biological specimens by annular dark-field STEM.

A A Sousa1, M Hohmann-Marriott, M A Aronova, G Zhang, R D Leapman.   

Abstract

It is shown that dark-field images collected in the scanning transmission electron microscope (STEM) at two different camera lengths yield quantitative distributions of both the heavy and light atoms in a stained biological specimen. Quantitative analysis of the paired STEM images requires knowledge of the elastic scattering cross sections, which are calculated from the NIST elastic scattering cross section database. The results reveal quantitative information about the distribution of fixative and stain within the biological matrix, and provide a basis for assessing detection limits for heavy-metal clusters used to label intracellular proteins. In sectioned cells that have been stained only with osmium tetroxide, we find an average of 1.2+/-0.1 Os atom per nm(3), corresponding to an atomic ratio of Os:C atoms of approximately 0.02, which indicates that small heavy atom clusters of Undecagold and Nanogold can be detected in lightly stained specimens.

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Year:  2008        PMID: 18359249      PMCID: PMC2705981          DOI: 10.1016/j.jsb.2008.01.007

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  31 in total

Review 1.  Enhanced labeling efficiency using ultrasmall immunogold probes: immunocytochemistry.

Authors:  J M Robinson; T Takizawa; D D Vandré
Journal:  J Histochem Cytochem       Date:  2000-04       Impact factor: 2.479

2.  Electron tomographic analysis of frozen-hydrated tissue sections.

Authors:  Chyong-Ere Hsieh; Michael Marko; Joachim Frank; Carmen A Mannella
Journal:  J Struct Biol       Date:  2002 Apr-May       Impact factor: 2.867

3.  Cryo-electron microscopy of vitreous sections of native biological cells and tissues.

Authors:  Ashraf Al-Amoudi; Lars P O Norlen; Jacques Dubochet
Journal:  J Struct Biol       Date:  2004-10       Impact factor: 2.867

4.  Focused-ion-beam thinning of frozen-hydrated biological specimens for cryo-electron microscopy.

Authors:  Michael Marko; Chyongere Hsieh; Richard Schalek; Joachim Frank; Carmen Mannella
Journal:  Nat Methods       Date:  2007-02-04       Impact factor: 28.547

5.  Quantitative STEM mass measurement of biological macromolecules in a 300 kV TEM.

Authors:  Alioscka A Sousa; Richard D Leapman
Journal:  J Microsc       Date:  2007-10       Impact factor: 1.758

6.  The quantitative analysis of thin specimens: a review of progress from the Cliff-Lorimer to the new zeta-factor methods.

Authors:  M Watanabe; D B Williams
Journal:  J Microsc       Date:  2006-02       Impact factor: 1.758

7.  On the feasibility of visualizing ultrasmall gold labels in biological specimens by STEM tomography.

Authors:  A A Sousa; M A Aronova; Y C Kim; L M Dorward; G Zhang; R D Leapman
Journal:  J Struct Biol       Date:  2007-06-28       Impact factor: 2.867

8.  Iterative methods for the three-dimensional reconstruction of an object from projections.

Authors:  P Gilbert
Journal:  J Theor Biol       Date:  1972-07       Impact factor: 2.691

9.  Concentration evaluation of chromatin in unstained resin-embedded sections by means of low-dose ratio-contrast imaging in STEM.

Authors:  B Bohrmann; M Haider; E Kellenberger
Journal:  Ultramicroscopy       Date:  1993-02       Impact factor: 2.689

Review 10.  New frontiers in gold labeling.

Authors:  J F Hainfeld; R D Powell
Journal:  J Histochem Cytochem       Date:  2000-04       Impact factor: 2.479

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  15 in total

1.  Dual-axis electron tomography of biological specimens: Extending the limits of specimen thickness with bright-field STEM imaging.

Authors:  Alioscka A Sousa; Afrouz A Azari; Guofeng Zhang; Richard D Leapman
Journal:  J Struct Biol       Date:  2010-11-03       Impact factor: 2.867

2.  Simulating STEM imaging of nanoparticles in micrometers-thick substrates.

Authors:  H Demers; N Poirier-Demers; D Drouin; N de Jonge
Journal:  Microsc Microanal       Date:  2010-10-20       Impact factor: 4.127

3.  Electron microscopy of whole cells in liquid with nanometer resolution.

Authors:  N de Jonge; D B Peckys; G J Kremers; D W Piston
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-21       Impact factor: 11.205

4.  Nanometer-resolution electron microscopy through micrometers-thick water layers.

Authors:  Niels de Jonge; Nicolas Poirier-Demers; Hendrix Demers; Diana B Peckys; Dominique Drouin
Journal:  Ultramicroscopy       Date:  2010-06-02       Impact factor: 2.689

5.  Three-dimensional scanning transmission electron microscopy of biological specimens.

Authors:  Niels de Jonge; Rachid Sougrat; Brian M Northan; Stephen J Pennycook
Journal:  Microsc Microanal       Date:  2010-02       Impact factor: 4.127

6.  Stomatobaculum longum gen. nov., sp. nov., an obligately anaerobic bacterium from the human oral cavity.

Authors:  Maria V Sizova; Paul Muller; Nicolai Panikov; Manolis Mandalakis; Tine Hohmann; Amanda Hazen; William Fowle; Tanya Prozorov; Dennis A Bazylinski; Slava S Epstein
Journal:  Int J Syst Evol Microbiol       Date:  2012-07-27       Impact factor: 2.747

7.  Imaging the distribution of individual platinum-based anticancer drug molecules attached to single-wall carbon nanotubes.

Authors:  Ashwin A Bhirde; Alioscka A Sousa; Vyomesh Patel; Afrouz A Azari; J Silvio Gutkind; Richard D Leapman; James F Rusling
Journal:  Nanomedicine (Lond)       Date:  2009-10       Impact factor: 5.307

8.  Nanoscale imaging of whole cells using a liquid enclosure and a scanning transmission electron microscope.

Authors:  Diana B Peckys; Gabriel M Veith; David C Joy; Niels de Jonge
Journal:  PLoS One       Date:  2009-12-14       Impact factor: 3.240

Review 9.  Development and application of STEM for the biological sciences.

Authors:  Alioscka A Sousa; Richard D Leapman
Journal:  Ultramicroscopy       Date:  2012-05-18       Impact factor: 2.689

10.  Detection of isolated protein-bound metal ions by single-particle cryo-STEM.

Authors:  Nadav Elad; Giuliano Bellapadrona; Lothar Houben; Irit Sagi; Michael Elbaum
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-02       Impact factor: 11.205

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