Literature DB >> 18319070

A critical appraisal of the scientific basis of commercial genomic profiles used to assess health risks and personalize health interventions.

A Cecile J W Janssens1, Marta Gwinn, Linda A Bradley, Ben A Oostra, Cornelia M van Duijn, Muin J Khoury.   

Abstract

Predictive genomic profiling used to produce personalized nutrition and other lifestyle health recommendations is currently offered directly to consumers. By examining previous meta-analyses and HuGE reviews, we assessed the scientific evidence supporting the purported gene-disease associations for genes included in genomic profiles offered online. We identified seven companies that offer predictive genomic profiling. We searched PubMed for meta-analyses and HuGE reviews of studies of gene-disease associations published from 2000 through June 2007 in which the genotypes of people with a disease were compared with those of a healthy or general-population control group. The seven companies tested at least 69 different polymorphisms in 56 genes. Of the 56 genes tested, 24 (43%) were not reviewed in meta-analyses. For the remaining 32 genes, we found 260 meta-analyses that examined 160 unique polymorphism-disease associations, of which only 60 (38%) were found to be statistically significant. Even the 60 significant associations, which involved 29 different polymorphisms and 28 different diseases, were generally modest, with synthetic odds ratios ranging from 0.54 to 0.88 for protective variants and from 1.04 to 3.2 for risk variants. Furthermore, genes in cardiogenomic profiles were more frequently associated with noncardiovascular diseases than with cardiovascular diseases, and though two of the five genes of the osteogenomic profiles did show significant associations with disease, the associations were not with bone diseases. There is insufficient scientific evidence to conclude that genomic profiles are useful in measuring genetic risk for common diseases or in developing personalized diet and lifestyle recommendations for disease prevention.

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Year:  2008        PMID: 18319070      PMCID: PMC2427295          DOI: 10.1016/j.ajhg.2007.12.020

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  26 in total

1.  Misconceptions about the use of genetic tests in populations.

Authors:  P Vineis; P Schulte; A J McMichael
Journal:  Lancet       Date:  2001-03-03       Impact factor: 79.321

2.  Will genetics revolutionize medicine?

Authors:  N A Holtzman; T M Marteau
Journal:  N Engl J Med       Date:  2000-07-13       Impact factor: 91.245

3.  Replication validity of genetic association studies.

Authors:  J P Ioannidis; E E Ntzani; T A Trikalinos; D G Contopoulos-Ioannidis
Journal:  Nat Genet       Date:  2001-11       Impact factor: 38.330

4.  Associations between cytokine gene polymorphisms and recurrent pregnancy loss.

Authors:  Silvia Daher; Natalia Shulzhenko; Andrey Morgun; Rosiane Mattar; Gisele F Rampim; Luiz Camano; Maria Gerbase DeLima
Journal:  J Reprod Immunol       Date:  2003-02       Impact factor: 4.054

Review 5.  Genetic associations: false or true?

Authors:  John P A Ioannidis
Journal:  Trends Mol Med       Date:  2003-04       Impact factor: 11.951

6.  Genetic testing for sale.

Authors:  Paolo Vineis; David C Christiani
Journal:  Epidemiology       Date:  2004-01       Impact factor: 4.822

Review 7.  Genomic profiling to promote a healthy lifestyle: not ready for prime time.

Authors:  Susanne B Haga; Muin J Khoury; Wylie Burke
Journal:  Nat Genet       Date:  2003-08       Impact factor: 38.330

Review 8.  The genetic basis for smoking behavior: a systematic review and meta-analysis.

Authors:  Marcus Munafò; Taane Clark; Elaine Johnstone; Michael Murphy; Robert Walton
Journal:  Nicotine Tob Res       Date:  2004-08       Impact factor: 4.244

Review 9.  Nutrigenomics and nutrigenetics.

Authors:  Jose M Ordovas; Vincent Mooser
Journal:  Curr Opin Lipidol       Date:  2004-04       Impact factor: 4.776

Review 10.  The case for strategic international alliances to harness nutritional genomics for public and personal health.

Authors:  Jim Kaput; Jose M Ordovas; Lynnette Ferguson; Ben van Ommen; Raymond L Rodriguez; Lindsay Allen; Bruce N Ames; Kevin Dawson; Bruce German; Ronald Krauss; Wasyl Malyj; Michael C Archer; Stephen Barnes; Amelia Bartholomew; Ruth Birk; Peter van Bladeren; Kent J Bradford; Kenneth H Brown; Rosane Caetano; David Castle; Ruth Chadwick; Stephen Clarke; Karine Clément; Craig A Cooney; Dolores Corella; Ivana Beatrice Manica da Cruz; Hannelore Daniel; Troy Duster; Sven O E Ebbesson; Ruan Elliott; Susan Fairweather-Tait; Jim Felton; Michael Fenech; John W Finley; Nancy Fogg-Johnson; Rosalynn Gill-Garrison; Michael J Gibney; Peter J Gillies; Jan-Ake Gustafsson; John L Hartman; Lin He; Jae-Kwan Hwang; Jean-Philippe Jais; Yangsoo Jang; Hans Joost; Claudine Junien; Mitchell Kanter; Warren A Kibbe; Berthold Koletzko; Bruce R Korf; Kenneth Kornman; David W Krempin; Dominique Langin; Denis R Lauren; Jong Ho Lee; Gilbert A Leveille; Su-Ju Lin; John Mathers; Michael Mayne; Warren McNabb; John A Milner; Peter Morgan; Michael Muller; Yuri Nikolsky; Frans van der Ouderaa; Taesun Park; Norma Pensel; Francisco Perez-Jimenez; Kaisa Poutanen; Matthew Roberts; Wim H M Saris; Gertrud Schuster; Andrew N Shelling; Artemis P Simopoulos; Sue Southon; E Shyong Tai; Bradford Towne; Paul Trayhurn; Ricardo Uauy; Willard J Visek; Craig Warden; Rick Weiss; John Wiencke; Jack Winkler; George L Wolff; Xi Zhao-Wilson; Jean-Daniel Zucker
Journal:  Br J Nutr       Date:  2005-11       Impact factor: 3.718

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  72 in total

1.  Users' motivations to purchase direct-to-consumer genome-wide testing: an exploratory study of personal stories.

Authors:  Yeyang Su; Heidi C Howard; Pascal Borry
Journal:  J Community Genet       Date:  2011-05-28

2.  Is there a doctor in the house? : The presence of physicians in the direct-to-consumer genetic testing context.

Authors:  Heidi Carmen Howard; Pascal Borry
Journal:  J Community Genet       Date:  2011-09-06

3.  Legislation on direct-to-consumer genetic testing in seven European countries.

Authors:  Pascal Borry; Rachel E van Hellemondt; Dominique Sprumont; Camilla Fittipaldi Duarte Jales; Emmanuelle Rial-Sebbag; Tade Matthias Spranger; Liam Curren; Jane Kaye; Herman Nys; Heidi Howard
Journal:  Eur J Hum Genet       Date:  2012-01-25       Impact factor: 4.246

4.  Genetic counseling and the ethical issues around direct to consumer genetic testing.

Authors:  Alice K Hawkins; Anita Ho
Journal:  J Genet Couns       Date:  2012-06       Impact factor: 2.537

5.  Which way for genetic-test regulation? Assign regulation appropriate to the level of risk.

Authors:  Gail Javitt
Journal:  Nature       Date:  2010-08-12       Impact factor: 49.962

6.  Health system implications of direct-to-consumer personal genome testing.

Authors:  Amy L McGuire; Wylie Burke
Journal:  Public Health Genomics       Date:  2010-11-13       Impact factor: 2.000

7.  Personal genomics and individual identities: motivations and moral imperatives of early users.

Authors:  Michelle L McGowan; Jennifer R Fishman; Marcie A Lambrix
Journal:  New Genet Soc       Date:  2010-09-01

8.  Public awareness and use of direct-to-consumer genetic tests: results from 3 state population-based surveys, 2006.

Authors:  Katrina A B Goddard; Debra Duquette; Amy Zlot; Jenny Johnson; Ann Annis-Emeott; Patrick W Lee; Mary Pat Bland; Karen L Edwards; Kristin Oehlke; Rebecca T Giles; Ann Rafferty; Michelle L Cook; Muin J Khoury
Journal:  Am J Public Health       Date:  2008-12-23       Impact factor: 9.308

Review 9.  Genetic susceptibility testing for neurodegenerative diseases: ethical and practice issues.

Authors:  J Scott Roberts; Wendy R Uhlmann
Journal:  Prog Neurobiol       Date:  2013-04-09       Impact factor: 11.685

10.  Personalized medicine and genomics: challenges and opportunities in assessing effectiveness, cost-effectiveness, and future research priorities.

Authors:  Rena Conti; David L Veenstra; Katrina Armstrong; Lawrence J Lesko; Scott D Grosse
Journal:  Med Decis Making       Date:  2010-01-04       Impact factor: 2.583

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