Literature DB >> 18220504

Glycomics: towards bioinformatic approaches to understanding glycosylation.

Lara K Mahal1.   

Abstract

Cell surface glycoconjugates control a variety of biological events including cell differentiation, homing to specific tissues, cell adhesion, virus/cell recognition and immunological recognition. The heterogeneity and diversity of these molecules present a challenge to understanding both their functions and how those functions are encoded. Advances in biotechnology have led to new methods for genome and proteome study that allow for the analysis of the entire genetic or protein content of a cell. Efforts towards the systematic study of the variations in cellular glycoconjugates are, in contrast, in their infancy. Recent advances in glycosylation related technology have begun to open up the possibility of exploring both the structure and the functions of the glycome in a systematic manner. This review focuses on the latest mass spectrometry, microarray-based and computational technologies for glycomics.

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Year:  2008        PMID: 18220504     DOI: 10.2174/187152008783330806

Source DB:  PubMed          Journal:  Anticancer Agents Med Chem        ISSN: 1871-5206            Impact factor:   2.505


  14 in total

1.  Evaluation of ion mobility-mass spectrometry for determining the isomeric heterogeneity of oligosaccharide-alditols derived from bovine submaxillary mucin.

Authors:  Hongli Li; Brad Bendiak; Kimberly Kaplan; Eric Davis; William F Siems; Herbert H Hill
Journal:  Int J Mass Spectrom       Date:  2013-10-15       Impact factor: 1.986

Review 2.  Application of microarrays for deciphering the structure and function of the human glycome.

Authors:  David F Smith; Richard D Cummings
Journal:  Mol Cell Proteomics       Date:  2013-02-14       Impact factor: 5.911

3.  Characterization of protein-DNA interactions using protein microarrays.

Authors:  Shaohui Hu; Zhi Xie; Seth Blackshaw; Jiang Qian; Heng Zhu
Journal:  Cold Spring Harb Protoc       Date:  2011-05-01

Review 4.  Bioinformatics and molecular modeling in glycobiology.

Authors:  Martin Frank; Siegfried Schloissnig
Journal:  Cell Mol Life Sci       Date:  2010-04-04       Impact factor: 9.261

Review 5.  The evolutionary consequences of erroneous protein synthesis.

Authors:  D Allan Drummond; Claus O Wilke
Journal:  Nat Rev Genet       Date:  2009-10       Impact factor: 53.242

6.  Carbohydrate structure characterization by tandem ion mobility mass spectrometry (IMMS)2.

Authors:  Hongli Li; Brad Bendiak; William F Siems; David R Gang; Herbert H Hill
Journal:  Anal Chem       Date:  2013-02-20       Impact factor: 6.986

7.  Resolving structural isomers of monosaccharide methyl glycosides using drift tube and traveling wave ion mobility mass spectrometry.

Authors:  Hongli Li; Kevin Giles; Brad Bendiak; Kimberly Kaplan; William F Siems; Herbert H Hill
Journal:  Anal Chem       Date:  2012-03-13       Impact factor: 6.986

Review 8.  Protein modifications in transcription elongation.

Authors:  Stephen M Fuchs; R Nicholas Laribee; Brian D Strahl
Journal:  Biochim Biophys Acta       Date:  2008-07-30

Review 9.  Glycomic analysis: an array of technologies.

Authors:  Lakshmi Krishnamoorthy; Lara K Mahal
Journal:  ACS Chem Biol       Date:  2009-09-18       Impact factor: 5.100

10.  Current approaches on viral infection: proteomics and functional validations.

Authors:  Jie Zheng; Boon Huan Tan; Richard Sugrue; Kai Tang
Journal:  Front Microbiol       Date:  2012-11-16       Impact factor: 5.640

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