Literature DB >> 19728746

Glycomic analysis: an array of technologies.

Lakshmi Krishnamoorthy1, Lara K Mahal.   

Abstract

Carbohydrates encode biological information necessary for cellular function. The structural diversity and complexity of these sugar residues have necessitated the creation of novel methodologies for their study. This review highlights recent technological advancements that are starting to unravel the intricate web of carbohydrate biology. New methods for the analysis of both glycoconjugates and glycan structures are discussed. With the use of these innovative tools, the field of glycobiology is poised to take center-stage in the postgenomic era of modern biology and medicine.

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Year:  2009        PMID： 19728746      PMCID： PMC3443568          DOI： 10.1021/cb900103n

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN： 1554-8929            Impact factor:   5.100


  165 in total

1.  Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins.

Authors:  Hiroyuki Kaji; Haruna Saito; Yoshio Yamauchi; Takashi Shinkawa; Masato Taoka; Jun Hirabayashi; Ken-ichi Kasai; Nobuhiro Takahashi; Toshiaki Isobe
Journal:  Nat Biotechnol       Date:  2003-05-18       Impact factor: 54.908

2.  Software platform for high-throughput glycomics.

Authors:  S Y Vakhrushev; D Dadimov; J Peter-Katalinić
Journal:  Anal Chem       Date:  2009-05-01       Impact factor: 6.986

3.  Highly specific enrichment of glycopeptides using boronic acid-functionalized mesoporous silica.

Authors:  Yawei Xu; Zhangxiong Wu; Lijuan Zhang; Haojie Lu; Pengyuan Yang; Paul A Webley; Dongyuan Zhao
Journal:  Anal Chem       Date:  2009-01-01       Impact factor: 6.986

4.  High throughput quantitative glycomics and glycoform-focused proteomics of murine dermis and epidermis.

Authors:  Rie Uematsu; Jun-ichi Furukawa; Hiroaki Nakagawa; Yasuro Shinohara; Kisaburo Deguchi; Kenji Monde; Shin-Ichiro Nishimura
Journal:  Mol Cell Proteomics       Date:  2005-09-16       Impact factor: 5.911

5.  Detecting glycan cancer biomarkers in serum samples using MALDI FT-ICR mass spectrometry data.

Authors:  Donald A Barkauskas; Hyun Joo An; Scott R Kronewitter; Maria Lorna de Leoz; Helen K Chew; Ralph W de Vere White; Gary S Leiserowitz; Suzanne Miyamoto; Carlito B Lebrilla; David M Rocke
Journal:  Bioinformatics       Date:  2008-12-09       Impact factor: 6.937

6.  A new strategy for identification of N-glycosylated proteins and unambiguous assignment of their glycosylation sites using HILIC enrichment and partial deglycosylation.

Authors:  Per Hägglund; Jakob Bunkenborg; Felix Elortza; Ole Nørregaard Jensen; Peter Roepstorff
Journal:  J Proteome Res       Date:  2004 May-Jun       Impact factor: 4.466

7.  Variability, heritability and environmental determinants of human plasma N-glycome.

Authors:  Ana Knezević; Ozren Polasek; Olga Gornik; Igor Rudan; Harry Campbell; Caroline Hayward; Alan Wright; Ivana Kolcic; Niaobh O'Donoghue; Jonathan Bones; Pauline M Rudd; Gordan Lauc
Journal:  J Proteome Res       Date:  2009-02       Impact factor: 4.466

8.  Glycoproteomics and glycomics investigation of membrane N-glycosylproteins from human colon carcinoma cells.

Authors:  Anne-Sophie Vercoutter-Edouart; Marie-Christine Slomianny; Olivia Dekeyzer-Beseme; Jean-François Haeuw; Jean-Claude Michalski
Journal:  Proteomics       Date:  2008-08       Impact factor: 3.984

9.  An enzymatic deglycosylation scheme enabling identification of core fucosylated N-glycans and O-glycosylation site mapping of human plasma proteins.

Authors:  Per Hägglund; Rune Matthiesen; Felix Elortza; Peter Højrup; Peter Roepstorff; Ole Nørregaard Jensen; Jakob Bunkenborg
Journal:  J Proteome Res       Date:  2007-07-18       Impact factor: 4.466

Review 10.  Biological roles of oligosaccharides: all of the theories are correct.

Authors:  A Varki
Journal:  Glycobiology       Date:  1993-04       Impact factor: 4.313
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  28 in total

1.  Photogenerated lectin sensors produced by thiol-ene/yne photo-click chemistry in aqueous solution.

Authors:  Oscar Norberg; Irene H Lee; Teodor Aastrup; Mingdi Yan; Olof Ramström
Journal:  Biosens Bioelectron       Date:  2012-01-28       Impact factor: 10.618

2.  Serum antiglycan antibody detection of nonmucinous ovarian cancers by using a printed glycan array.

Authors:  Francis Jacob; Darlene R Goldstein; Nicolai V Bovin; Tatiana Pochechueva; Marianne Spengler; Rosemarie Caduff; Daniel Fink; Marko I Vuskovic; Margaret E Huflejt; Viola Heinzelmann-Schwarz
Journal:  Int J Cancer       Date:  2011-04-25       Impact factor: 7.396

3.  Structural Characterization of Carbohydrates by Fourier Transform Tandem Mass Spectrometry.

Authors:  Wen Zhou; Kristina Håkansson
Journal:  Curr Proteomics       Date:  2011-12-01       Impact factor: 0.837

Review 4.  Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: an update for 2009-2010.

Authors:  David J Harvey
Journal:  Mass Spectrom Rev       Date:  2014-05-26       Impact factor: 10.946

5.  Hesperetin on Cell Surface Glycoconjugates Abnormalities and Immunohistochemical Staining with Cytokeratin in 7,12 Dimethylbenz(a)anthracene Induced Hamster Buccal Pouch Carcinogenesis.

Authors:  Sukumar Babukumar; Veerasamy Vinothkumar; Periyannan Velu; Duraisamy Ramachandhiran
Journal:  Indian J Clin Biochem       Date:  2017-11-04

6.  Targeted glycomics by selected reaction monitoring for highly sensitive glycan compositional analysis.

Authors:  Hongquan Zhang; Zhaohui Wang; Jacek Stupak; Othman Ghribi; Jonathan D Geiger; Qing Yan Liu; Jianjun Li
Journal:  Proteomics       Date:  2012-07-23       Impact factor: 3.984

7.  Serum glycosylation characterization of osteonecrosis of the femoral head by mass spectrometry.

Authors:  Ting Song; Peng Chen; Carol Stroble; L Renee Ruhaak; Haibin Wang; Ziqi Li; Wei He; Carlito B Lebrilla
Journal:  Eur J Mass Spectrom (Chichester)       Date:  2017-12-09       Impact factor: 1.067

8.  Electron detachment dissociation of fluorescently labeled sialylated oligosaccharides.

Authors:  Wen Zhou; Kristina Håkansson
Journal:  Electrophoresis       Date:  2011-11-24       Impact factor: 3.535

9.  Sensing lectin-glycan interactions using lectin super-microarrays and glycans labeled with dye-doped silica nanoparticles.

Authors:  Xin Wang; Elena Matei; Lingquan Deng; Leonardus Koharudin; Angela M Gronenborn; Olof Ramström; Mingdi Yan
Journal:  Biosens Bioelectron       Date:  2013-03-21       Impact factor: 10.618

Review 10.  Bioinformatics and molecular modeling in glycobiology.

Authors:  Martin Frank; Siegfried Schloissnig
Journal:  Cell Mol Life Sci       Date:  2010-04-04       Impact factor: 9.261
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