Literature DB >> 18718879

Protein modifications in transcription elongation.

Stephen M Fuchs1, R Nicholas Laribee, Brian D Strahl.   

Abstract

Posttranslational modifications (PTMs) of proteins play essential roles in regulating signaling, protein-protein modifications and subcellular localization. In this review, we focus on posttranslational modification of histones and RNA polymerase II (RNAPII) and their roles in gene transcription. A survey of the basic features of PTMs is provided followed by a more detailed account of how PTMs on histones and RNAPII regulate transcription in the model organism Saccharomyces cerevisiae. We emphasize the interconnections between histone and RNAPII PTMs and speculate upon the larger role PTMs have in regulating protein function in the cell.

Entities:  

Mesh：

Substances：

Year:  2008        PMID： 18718879      PMCID： PMC2641038          DOI： 10.1016/j.bbagrm.2008.07.008

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN： 0006-3002


  186 in total

1.  A role for Saccharomyces cerevisiae histone H2A in DNA repair.

Authors:  J A Downs; N F Lowndes; S P Jackson
Journal:  Nature       Date:  2000 Dec 21-28       Impact factor: 49.962

Review 2.  Phosphorylation of serine 10 in histone H3, what for?

Authors:  Claude Prigent; Stefan Dimitrov
Journal:  J Cell Sci       Date:  2003-09-15       Impact factor: 5.285

Review 3.  The SH2 domain: versatile signaling module and pharmaceutical target.

Authors:  Kazuya Machida; Bruce J Mayer
Journal:  Biochim Biophys Acta       Date:  2004-11-19

4.  Histone crosstalk between H2B monoubiquitination and H3 methylation mediated by COMPASS.

Authors:  Jung-Shin Lee; Abhijit Shukla; Jessica Schneider; Selene K Swanson; Michael P Washburn; Laurence Florens; Sukesh R Bhaumik; Ali Shilatifard
Journal:  Cell       Date:  2007-12-14       Impact factor: 41.582

5.  Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4.

Authors:  Michiel Vermeulen; Klaas W Mulder; Sergei Denissov; W W M Pim Pijnappel; Frederik M A van Schaik; Radhika A Varier; Marijke P A Baltissen; Henk G Stunnenberg; Matthias Mann; H Th Marc Timmers
Journal:  Cell       Date:  2007-09-20       Impact factor: 41.582

6.  A new role for histone tail modifications in transcription elongation.

Authors:  Grant A Hartzog; John W Tamkun
Journal:  Genes Dev       Date:  2007-12-15       Impact factor: 11.361

Review 7.  Reversible phosphorylation of the C-terminal domain of RNA polymerase II.

Authors:  M E Dahmus
Journal:  J Biol Chem       Date:  1996-08-09       Impact factor: 5.157

8.  Histone H2B deacetylation at lysine 11 is required for yeast apoptosis induced by phosphorylation of H2B at serine 10.

Authors:  Sung-Hee Ahn; Robert L Diaz; Michael Grunstein; C David Allis
Journal:  Mol Cell       Date:  2006-10-20       Impact factor: 17.970

9.  Requirement of Hos2 histone deacetylase for gene activity in yeast.

Authors:  Amy Wang; Siavash K Kurdistani; Michael Grunstein
Journal:  Science       Date:  2002-11-15       Impact factor: 47.728

10.  Demethylation of trimethylated histone H3 Lys4 in vivo by JARID1 JmjC proteins.

Authors:  David J Seward; Gabrielle Cubberley; Soojin Kim; Matt Schonewald; Lian Zhang; Brian Tripet; David L Bentley
Journal:  Nat Struct Mol Biol       Date:  2007-02-18       Impact factor: 15.369
View more
  34 in total

1.  Single-molecule tools elucidate H2A.Z nucleosome composition.

Authors:  Jiji Chen; Andrew Miller; Ann L Kirchmaier; Joseph M K Irudayaraj
Journal:  J Cell Sci       Date:  2012-03-05       Impact factor: 5.285

Review 2.  Insights into SAGA function during gene expression.

Authors:  Susana Rodríguez-Navarro
Journal:  EMBO Rep       Date:  2009-07-17       Impact factor: 8.807

3.  Histone modification levels are predictive for gene expression.

Authors:  Rosa Karlić; Ho-Ryun Chung; Julia Lasserre; Kristian Vlahovicek; Martin Vingron
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-01       Impact factor: 11.205

Review 4.  Epigenome manipulation as a pathway to new natural product scaffolds and their congeners.

Authors:  Robert H Cichewicz
Journal:  Nat Prod Rep       Date:  2009-10-27       Impact factor: 13.423

5.  Effects of Acetylation and Phosphorylation on Subunit Interactions in Three Large Eukaryotic Complexes.

Authors:  Nikolina Šoštarić; Francis J O'Reilly; Piero Giansanti; Albert J R Heck; Anne-Claude Gavin; Vera van Noort
Journal:  Mol Cell Proteomics       Date:  2018-09-04       Impact factor: 5.911

Review 6.  Chromatin and transcription in yeast.

Authors:  Oliver J Rando; Fred Winston
Journal:  Genetics       Date:  2012-02       Impact factor: 4.562

Review 7.  Insights from resolving protein-DNA interactions at near base-pair resolution.

Authors:  Bryan J Venters
Journal:  Brief Funct Genomics       Date:  2018-03-01       Impact factor: 4.241

Review 8.  Metabolic choreography of gene expression: nutrient transactions with the epigenome.

Authors:  Babukrishna Maniyadath; U S Sandra; Ullas Kolthur-Seetharam
Journal:  J Biosci       Date:  2020       Impact factor: 1.826

9.  Comprehensive RNA Polymerase II Interactomes Reveal Distinct and Varied Roles for Each Phospho-CTD Residue.

Authors:  Kevin M Harlen; Kristine L Trotta; Erin E Smith; Mohammad M Mosaheb; Stephen M Fuchs; L Stirling Churchman
Journal:  Cell Rep       Date:  2016-05-26       Impact factor: 9.423

10.  Peptide microarrays to interrogate the "histone code".

Authors:  Scott B Rothbart; Krzysztof Krajewski; Brian D Strahl; Stephen M Fuchs
Journal:  Methods Enzymol       Date:  2012       Impact factor: 1.600
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.