Literature DB >> 1820275

The Genetic Activity Profile database.

M D Waters1, H F Stack, N E Garrett, M A Jackson.   

Abstract

A graphic approach termed a Genetic Activity Profile (GAP) has been developed to display a matrix of data on the genetic and related effects of selected chemical agents. The profiles provide a visual overview of the quantitative (doses) and qualitative (test results) data for each chemical. Either the lowest effective dose (LED) or highest ineffective dose (HID) is recorded for each agent and bioassay. Up to 200 different test systems are represented across the GAP. Bioassay systems are organized according to the phylogeny of the test organisms and the end points of genetic activity. The methodology for the production and evaluation of GAPs has been developed in collaboration with the International Agency for Research on Cancer. Data on individual chemicals have been compiled by IARC and by the U.S. Environmental Protection Agency. Data are available on 299 compounds selected from volumes 1-50 of the IARC Monographs and on 115 compounds identified as Superfund Priority Substances. Software to display the GAPs on an IBM-compatible personal computer is available from the authors. Structurally similar compounds frequently display qualitatively and quantitatively similar GAPs. By examining the patterns of GAPs of pairs and groups of chemicals, it is possible to make more informed decisions regarding the selection of test batteries to be used in evaluating chemical analogs. GAPs have provided useful data for the development of weight-of-evidence hazard ranking schemes. Also, some knowledge of the potential genetic activity of complex environmental mixtures may be gained from assessing the GAPs of component chemicals. The fundamental techniques and computer programs devised for the GAP database may be used to develop similar databases in other disciplines.

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Year:  1991        PMID: 1820275      PMCID: PMC1568230          DOI: 10.1289/ehp.919641

Source DB:  PubMed          Journal:  Environ Health Perspect        ISSN: 0091-6765            Impact factor:   9.031


  15 in total

1.  Activity profiles of developmental toxicity: design considerations and pilot implementation.

Authors:  R J Kavlock; J A Greene; G L Kimmel; R E Morrissey; E Owens; J M Rogers; T W Sadler; H F Stack; M D Waters; F Welsch
Journal:  Teratology       Date:  1991-02

Review 2.  Strategies for the use of computational SAR methods in assessing genotoxicity.

Authors:  A M Richard; J R Rabinowitz; M D Waters
Journal:  Mutat Res       Date:  1989-11       Impact factor: 2.433

3.  Use of computerized data listings and activity profiles of genetic and related effects in the review of 195 compounds.

Authors:  M D Waters; H F Stack; A L Brady; P H Lohman; L Haroun; H Vainio
Journal:  Mutat Res       Date:  1988 May-Aug       Impact factor: 2.433

4.  Genetic activity profiles and pattern recognition in test battery selection.

Authors:  M D Waters; H F Stack; J R Rabinowitz; N E Garrett
Journal:  Mutat Res       Date:  1988 May-Aug       Impact factor: 2.433

5.  The GENE-TOX program: genetic activity evaluation.

Authors:  M D Waters; A Auletta
Journal:  J Chem Inf Comput Sci       Date:  1981-02

6.  A proposed method for assembly and interpretation of short-term test data.

Authors:  D Brusick
Journal:  Environ Health Perspect       Date:  1991-12       Impact factor: 9.031

7.  Ranking the potential carcinogenic hazards to workers from exposures to chemicals that are tumorigenic in rodents.

Authors:  L S Gold; G M Backman; N K Hooper; R Peto
Journal:  Environ Health Perspect       Date:  1987-12       Impact factor: 9.031

8.  The Carcinogenic Potency Database: analyses of 4000 chronic animal cancer experiments published in the general literature and by the U.S. National Cancer Institute/National Toxicology Program.

Authors:  L S Gold; T H Slone; N B Manley; G B Garfinkel; E S Hudes; L Rohrbach; B N Ames
Journal:  Environ Health Perspect       Date:  1991-12       Impact factor: 9.031

9.  A carcinogenic potency database of the standardized results of animal bioassays.

Authors:  L S Gold; C B Sawyer; R Magaw; G M Backman; M de Veciana; R Levinson; N K Hooper; W R Havender; L Bernstein; R Peto
Journal:  Environ Health Perspect       Date:  1984-12       Impact factor: 9.031

10.  Characteristics of the U.S. EPA's Office of Pesticide Programs' toxicity information databases.

Authors:  K L Dearfield; J A Quest; R J Whiting; H F Stack; M D Waters
Journal:  Environ Health Perspect       Date:  1991-12       Impact factor: 9.031

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  3 in total

1.  Microelectrophoretic study of environmentally induced DNA damage in fish and its use for early toxicity screening of freshwater bodies.

Authors:  Bilal Hussain; Tayyaba Sultana; Salma Sultana; K A Al-Ghanim; Shahreef Masood; Muhammad Ali; Shahid Mahboob
Journal:  Environ Monit Assess       Date:  2017-02-17       Impact factor: 2.513

2.  Human exposures to mutagens--an analysis using the genetic activity profile database.

Authors:  R R Tice; H F Stack; M D Waters
Journal:  Environ Health Perspect       Date:  1996-05       Impact factor: 9.031

3.  Aspects of database construction and interrogation of relevance to the accurate prediction of rodent carcinogenicity and mutagenicity.

Authors:  J Ashby
Journal:  Environ Health Perspect       Date:  1991-12       Impact factor: 9.031

  3 in total

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