Literature DB >> 18185007

Kinetic theory of virus capsid assembly.

Paul van der Schoot1, Roya Zandi.   

Abstract

A phenomenological theory is presented for the kinetics of the in vitro assembly and disassembly of icosahedral virus capsids in solutions of coat proteins. The focus is on conditions where nucleation-type processes can be ignored. We find that the kinetics of assembly is strongly concentration dependent and that the late-stage relaxation time varies as the inverse of the square of the concentration. These findings are corroborated by experimental observations on a number of viruses. Further, our theory shows that hysteresis observed in some experiments could be a direct effect of the kinetics of a high-order mass action law, not necessarily the result of a free energy barrier between assembled and disassembled states.

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Year:  2007        PMID: 18185007     DOI: 10.1088/1478-3975/4/4/006

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  20 in total

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2.  Self-Assembly of an Alphavirus Core-like Particle Is Distinguished by Strong Intersubunit Association Energy and Structural Defects.

Authors:  Joseph Che-Yen Wang; Chao Chen; Vamseedhar Rayaprolu; Suchetana Mukhopadhyay; Adam Zlotnick
Journal:  ACS Nano       Date:  2015-08-21       Impact factor: 15.881

3.  Modeling Viral Capsid Assembly.

Authors:  Michael F Hagan
Journal:  Adv Chem Phys       Date:  2014       Impact factor: 1.000

4.  Controlling viral capsid assembly with templating.

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-05-08

5.  The role of multivalency in the association kinetics of patchy particle complexes.

Authors:  Arthur C Newton; Jan Groenewold; Willem K Kegel; Peter G Bolhuis
Journal:  J Chem Phys       Date:  2017-06-21       Impact factor: 3.488

6.  Nanosystem self-assembly pathways discovered via all-atom multiscale analysis.

Authors:  Stephen D Pankavich; Peter J Ortoleva
Journal:  J Phys Chem B       Date:  2012-03-21       Impact factor: 2.991

7.  Molecular dynamics study of T = 3 capsid assembly.

Authors:  D C Rapaport
Journal:  J Biol Phys       Date:  2018-04-02       Impact factor: 1.365

Review 8.  Studying viruses using solution X-ray scattering.

Authors:  Daniel Khaykelson; Uri Raviv
Journal:  Biophys Rev       Date:  2020-02-15

Review 9.  Recent advances in coarse-grained modeling of virus assembly.

Authors:  Michael F Hagan; Roya Zandi
Journal:  Curr Opin Virol       Date:  2016-03-24       Impact factor: 7.090

10.  Impact of the topology of viral RNAs on their encapsulation by virus coat proteins.

Authors:  Paul van der Schoot; Roya Zandi
Journal:  J Biol Phys       Date:  2013-03-14       Impact factor: 1.365

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